Transcript Information: R_Transcript_200430.p1


Annotated TAIR IDAT4G21065.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11245976-11247763 | Forward length=595
E-Value1.2E-290
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3081288684215
Replicate 21.2247841909507
Replicate 31.1453368798076
Condition 2: 8 Hour
Replicate 10.77538572332943
Replicate 20.52175390962766
Replicate 31.0588439528559
Condition 3: 24 Hour
Replicate 11.1478903613852
Replicate 21.7276619464286
Replicate 31.9698934218208


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200430.p1 GENE.R_Transcript_200430~~R_Transcript_200430.p1 ORF type:complete len:600 (+),score=82.52,PPR_2|PF13041.2|1e-13,PPR_2|PF13041.2|0.038,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|2.8e-05,PPR_2|PF13041.2|3.9e-06,PPR_2|PF13041.2|0.32,PPR_2|PF13041.2|0.28,PPR_2|PF13041.2|1.1e+03,PPR|PF01535.16|9.4e-07,PPR|PF01535.16|0.0071,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|0.018,PPR|PF01535.16|0.012,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|3.5e+02,DYW_deaminase|PF14432.2|9.9e-39,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|7.2e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|9.3e+02,PPR_3|PF13812.2|0.0004,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|70,PPR_3|PF13812.2|7e+03,PPR_3|PF13812.2|39,PPR_1|PF12854.3|0.00038,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.00049,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|0.00019,PPR_1|PF12854.3|0.00023,PPR_1|PF12854.3|77,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|6.8e+02 R_Transcript_200430:238-2037(+)
ATGTCTAAATCCTTTTGTTGCACTTTCTACTGCACACAGACCCATCCAACTAGCACCAAACCCTTGATTCTCAAGCAGTGCATTGCCCTTTTGCAAGCATGTGCTTCTTCCAAATACAAACTCAAACAAATACATGCATTTTCCATCAAACATGGTGTCTCACTAACAAAACCAGATTTGGGCAAACACCTTATCTTCTTTTCAGTTAGTCTTTCACAGCCCATGTCTTATGCCCACAAAATTTTTGCCCAAATAAAAAACCCAAATATATTTACATGGAATACCATGATTAGAGGCTATGCTCAGAGTGAAAACCCAAGATCAGCCCTTGATTTGTATACCCAAATGAAGGTTAATTCTATTGAGCCTGACACACATACATATCCTTTTTTGCTTAATGCTGTAGCTAAGTCGTTGGATGTTAAGTTGGGTGAAAAGGTGCATTGTATTGCAATAAAAAATGGGTATGAAACACTTGTTTTTGTACAGAACACTTTGGTGCATATGTATGCTAGTTTTGGGCAGGCTGAGAGTGCCCGCAAGGTGTTTGATAAAATGTCTGTGAGAAATCTTGTGACTTGGAACTCTGTTATTAATGGGTTTGCTCTGAATGGGAGGCCAACGGAGGTCCTGAATATTTTCAGGGATATGAGTTTGGAGGGTGTTGAGCCTGATGGGTTCACCCTGGTGAGTTTGTTGTGTGCTTGTGCTGAACTTGGCGCGTTGGCGTTAGGTAGGAGAGTACATGTTTATATGTTTAAGGTTGGTTTGACTGAGAATTTGCATGCAGGGAATGCACTCCTTGATCTTTATGCAAAGTGTGGAAGAATTAAGGAGGCTGAACGGGTTTTTGATGAGATGACCGAGAGAAGCGTGGTGTCTTGGACGTCTTTGATTGTGGGTTTGGCTGTAAATGGATTTGCTAACGAAGCGATTGAATTATTCAAGGAGATGGAGAAGATAGAGGGATTGTTGCCAACAGATATTACTTTAGTGGGAGTCTTGTATGCATGTAGTCATTGTGGGATGGTTGACGAGGGATTTGATTACTTTAACAAGATGAGAGACAGATATGGAATTGTGCCGAAGATTGAGCATTATGGTTGCATGGTTGATCTATTAGGCAGAGCAGGGAAGGTAAAAGAAGCATATGAATTCATTCAAAGCATGCCCTTACAACCCAATGCCGTTATTTGGAGGACATTGTTGGGTGCATGCTCAATACATGGTCATTTAGTTCTAGCAGAAACAGCAAGAAGTAAACTCGTAGAGCTAGACCCAAAGCATAGTGGAGATTATGTGCTTCTTTCAAACTTATACGCGTCTGAGCAACGCTGGACTGATGTCCATCAGTTAAGGGCGAAAATGATCAAGGAAGGAGTTAGAAAAACGCCTGGTATTAGCCTTGTTGAGTTAAGAAACAGAGTTCATGAGTTTGTAATGGGAGATCGGTCTCATCCTCAAGATAAAGAGATATACGAAATGCTACGAGAGATCTCAAAGTTGCTACGATTGGAAGGTTACGTGCCTCACACAGCAAACGTACTTGCAGACATACAGGAGGAAGAGAAGGAAACTGCCTTAACATATCACAGTGAAAAGATTGCTATTGCATTTATGCTCATTAATACATTACCAGGAACCCCTATCACTGTGATGAAGAACTTAAGGGTTTGTGCTGATTGCCACCTTGCCATTAAACTCATATCCAAAATTTTTGACCGTGAGATTGTTGTCAGGGATCGTAGTCGATTCCATCATTTCAAGCATGGATCCTGCTCTTGTAGAGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200430.p1 GENE.R_Transcript_200430~~R_Transcript_200430.p1 ORF type:complete len:600 (+),score=82.52,PPR_2|PF13041.2|1e-13,PPR_2|PF13041.2|0.038,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|2.8e-05,PPR_2|PF13041.2|3.9e-06,PPR_2|PF13041.2|0.32,PPR_2|PF13041.2|0.28,PPR_2|PF13041.2|1.1e+03,PPR|PF01535.16|9.4e-07,PPR|PF01535.16|0.0071,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|0.018,PPR|PF01535.16|0.012,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|3.5e+02,DYW_deaminase|PF14432.2|9.9e-39,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|7.2e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|9.3e+02,PPR_3|PF13812.2|0.0004,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|70,PPR_3|PF13812.2|7e+03,PPR_3|PF13812.2|39,PPR_1|PF12854.3|0.00038,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.00049,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|0.00019,PPR_1|PF12854.3|0.00023,PPR_1|PF12854.3|77,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|6.8e+02 R_Transcript_200430:238-2037(+)
MSKSFCCTFYCTQTHPTSTKPLILKQCIALLQACASSKYKLKQIHAFSIKHGVSLTKPDLGKHLIFFSVSLSQPMSYAHKIFAQIKNPNIFTWNTMIRGYAQSENPRSALDLYTQMKVNSIEPDTHTYPFLLNAVAKSLDVKLGEKVHCIAIKNGYETLVFVQNTLVHMYASFGQAESARKVFDKMSVRNLVTWNSVINGFALNGRPTEVLNIFRDMSLEGVEPDGFTLVSLLCACAELGALALGRRVHVYMFKVGLTENLHAGNALLDLYAKCGRIKEAERVFDEMTERSVVSWTSLIVGLAVNGFANEAIELFKEMEKIEGLLPTDITLVGVLYACSHCGMVDEGFDYFNKMRDRYGIVPKIEHYGCMVDLLGRAGKVKEAYEFIQSMPLQPNAVIWRTLLGACSIHGHLVLAETARSKLVELDPKHSGDYVLLSNLYASEQRWTDVHQLRAKMIKEGVRKTPGISLVELRNRVHEFVMGDRSHPQDKEIYEMLREISKLLRLEGYVPHTANVLADIQEEEKETALTYHSEKIAIAFMLINTLPGTPITVMKNLRVCADCHLAIKLISKIFDREIVVRDRSRFHHFKHGSCSCRDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST