Transcript Information: R_Transcript_200445.p1


Annotated TAIR IDAT2G22795.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37820.1); Has 799854 Blast hits to 188815 proteins in 4452 species: Archae - 4529; Bacteria - 144236; Metazoa - 287749; Fungi - 87083; Plants - 43826; Viruses - 3662; Other Eukaryotes - 228769 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:9697380-9699584 | Reverse length=734
E-Value9E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20451496868032
Replicate 20.11762633286441
Replicate 30
Condition 2: 8 Hour
Replicate 10.61729071295576
Replicate 20.81426180374065
Replicate 30.20337939070462
Condition 3: 24 Hour
Replicate 10.19292274981264
Replicate 20.061779436668284
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200445.p1 GENE.R_Transcript_200445~~R_Transcript_200445.p1 ORF type:internal len:357 (+),score=89.18,Collagen|PF01391.14|5.9e-09,Collagen|PF01391.14|4.7e-06,Collagen|PF01391.14|1e+04,Collagen|PF01391.14|1.3e+03,Collagen|PF01391.14|6.5e-09 R_Transcript_200445:2-1069(+)
GATCAAGGTTCTAAAGGAGCAAATGGAGACAATGGATGCAACGGATCTAACGGAGCAAAGGGAGATCAAGGTTCTAAAGGAGCAAATGGAGACAATGGATGCAACGGATCTAACGGAGCAAAGGGAGATCAAGGTTCTAAAGGAGCAAATGGAGACAATGGATGCAACGGATCTAACGGAGCAAAGGGAGATCAAGGTTCTAAAGGAGCAACTGGAACTCCAGGTACTCCAGGATCTAACGGAGCAAAGGGAGCACAAGGAGACAAGGGATGTGCAGGAGCACCTGGAGCAAATGGATCCAACGGAACCAACGGATGCAAGGGAGCATCTGGAGAGAAAGGATCCAAGGGAGCAAACGGAGAGAACGGAATGAACGGATGCAAGGGAGCAACTGGAGACAACGGTAACAAGGGAGCAAAGGGAGCAAATGGAGAAAACGGATGCAACGGAGAAAAGGGTAACAAGGGAGCAAACGGAGAAAACGGATGCAACGGTACAAACGGTGCAAAGGGAGCACAAGGAGACAAGGGATGTGCAGGAGCACCTGGAGCAAACGGAGCAAAGGGAGAACAAGGATCTAAGGGAGCAAACGGAGCTAACGGAATGAACGGATGCAAAGGAGCAAATGGAGATAACGGTAACAAGGGAGAACAAGGACCTTGTGGAGCAAACGGAACCCCTGGAGCAAATGGTGCAAAGGGAGCATCTGGAGAAAACGGAGAAAAAGGATGTGCAGGAGCACCTGGAGCAAACGGAGCAAAGGGAGAACAAGGATCTAAGGGAGCATCTGGAGATAACGGAGAAAATGGATGCAACGGAGCAAATGGAGCAAAGGGAGACCAAGGAAGCAAGGGATCCCAAGGTCCAAGCGGAGACTATGGTACCAACGGATGTAACGGAGAGAACGGTGCAAAGGGAGCAACCGGATCAAACGGAGATAAGGGAGCAAAGGGATCTCAAGGATCCAATGGAGACTGTGGTTCCAAGGGAGACAAGGGAGCATCTGGAAGCAACGGATCTAAGGGAGCTCAAGGTCCTAATGGAGACTGTGGCTCCAAGGGAGACAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200445.p1 GENE.R_Transcript_200445~~R_Transcript_200445.p1 ORF type:internal len:357 (+),score=89.18,Collagen|PF01391.14|5.9e-09,Collagen|PF01391.14|4.7e-06,Collagen|PF01391.14|1e+04,Collagen|PF01391.14|1.3e+03,Collagen|PF01391.14|6.5e-09 R_Transcript_200445:2-1069(+)
DQGSKGANGDNGCNGSNGAKGDQGSKGANGDNGCNGSNGAKGDQGSKGANGDNGCNGSNGAKGDQGSKGATGTPGTPGSNGAKGAQGDKGCAGAPGANGSNGTNGCKGASGEKGSKGANGENGMNGCKGATGDNGNKGAKGANGENGCNGEKGNKGANGENGCNGTNGAKGAQGDKGCAGAPGANGAKGEQGSKGANGANGMNGCKGANGDNGNKGEQGPCGANGTPGANGAKGASGENGEKGCAGAPGANGAKGEQGSKGASGDNGENGCNGANGAKGDQGSKGSQGPSGDYGTNGCNGENGAKGATGSNGDKGAKGSQGSNGDCGSKGDKGASGSNGSKGAQGPNGDCGSKGDK

Click here to download the sequence:
Link to NCBI Protein BLAST