Transcript Information: R_Transcript_200446.p1


Annotated TAIR IDAT3G28780.1
Annotated Gene NameProtein of unknown function (DUF1216)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:10806131-10808369 | Reverse length=674
E-Value8E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.092654624135628
Replicate 20
Replicate 30.11627785581803
Condition 2: 8 Hour
Replicate 10.62146865348338
Replicate 20.11350701442226
Replicate 30.32249054401703
Condition 3: 24 Hour
Replicate 10.34961127757925
Replicate 20.11195562888618
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200446.p1 GENE.R_Transcript_200446~~R_Transcript_200446.p1 ORF type:internal len:394 (+),score=111.92,Collagen|PF01391.14|3e-09,Collagen|PF01391.14|1.6e+04 R_Transcript_200446:2-1180(+)
GCAAAGGGAGACAACGGAGCAACTGGGGCACCAGGATGCAACGGAACCAACGGAAGCAATGGAGCAAAGGGAGATACTGGAGCAAAAGGAGCAAACGGAGAGAATGGAGCGCCAGGATGCAACGGATCAAACGGAGCAAAGGGAGACCAAGGTTCCAAAGGAGAGAATGGAGCACCAGGATGCAACGGATCTAATGGGGAAAAGGGAACTTCTGGAGCAAAGGGATCTAACGGAGAGAAGGGATGTTCTGGAGCAAATGGAAGCAATGGAGCAAAGGGAGACAACGGAGCAACTGGGGCACCAGGATGCAACGGAACCAACGGAAGCAATGGAGCAAAGGGAGATACTGGAGCAAAAGGAGCAAACGGAGAGAATGGAGCGCCAGGATGCAACGGATCAAACGGAGCAAAGGGAGATCAAGGTTCCAAGGGAGTGAATGGAGAAAAGGGATGCACTGGAGCACCAGGAGCAAATGGAAGCAACGGAGCAAAGGGAGCACAAGGTAACAAGGGTCAAAATGGAGAAAACGGAACTCCAGGAGCACCAGGAGTCAAAGGAGAACAAGGTTACAAAGGAGAAAAGGGAGTGAAAGGAGATACTGGGTGCCAAGGTATGACTGGAGAAAAGGGAACAACTGGAGAGAATGGAGCACCAGGATGCAACGGATCTAATGGAGCAAAGGGAGATCAAGGTTCAAAGGGAGCAACTGGAGAAAAGGGAGCAAACGGAGACAACGGATGCAACGGAGAAAAGGGAGCACAAGGTAACAAGGGAGATACTGGATGCAACGGAGCAAAGGGAGACAACGGAGCAAACGGATGCAATGGAGCAAAGGGAGACCAAGGACCAACAGGAGCACCAGGATGCAACGGATCTAATGGAGCAAAGGGAGATCAAGGTTCAAAGGGAGCAACTGGAGAAAAGGGAGCAAACGGAGACAACGGATGCAACGGAGAAAAGGGAGCACAAGGTAACAAGGGAGATACTGGATGCAACGGAGCAAAGGGAGACAACGGAGCAAACGGATGCAATGGAGCAAAGGGAGACCAAGGTTCAAAGGGAGCAACTGGTAACAAAGGAGCAAATGGAGAAAACGGATGCAACGGAGCTAACGGTGCAAAGGGAGACCAAGGATCAAATGGAGCAAAGGGAGATCAAGGAGCACCAGGATGCAACGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200446.p1 GENE.R_Transcript_200446~~R_Transcript_200446.p1 ORF type:internal len:394 (+),score=111.92,Collagen|PF01391.14|3e-09,Collagen|PF01391.14|1.6e+04 R_Transcript_200446:2-1180(+)
AKGDNGATGAPGCNGTNGSNGAKGDTGAKGANGENGAPGCNGSNGAKGDQGSKGENGAPGCNGSNGEKGTSGAKGSNGEKGCSGANGSNGAKGDNGATGAPGCNGTNGSNGAKGDTGAKGANGENGAPGCNGSNGAKGDQGSKGVNGEKGCTGAPGANGSNGAKGAQGNKGQNGENGTPGAPGVKGEQGYKGEKGVKGDTGCQGMTGEKGTTGENGAPGCNGSNGAKGDQGSKGATGEKGANGDNGCNGEKGAQGNKGDTGCNGAKGDNGANGCNGAKGDQGPTGAPGCNGSNGAKGDQGSKGATGEKGANGDNGCNGEKGAQGNKGDTGCNGAKGDNGANGCNGAKGDQGSKGATGNKGANGENGCNGANGAKGDQGSNGAKGDQGAPGCNG

Click here to download the sequence:
Link to NCBI Protein BLAST