Transcript Information: R_Transcript_200671.p1


Annotated TAIR IDAT5G47570.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19292869-19294666 | Reverse length=125
E-Value9.4E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27448061586043
Replicate 20.15786692042329
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.16812693113673
Replicate 30.13647827534126
Condition 3: 24 Hour
Replicate 10
Replicate 20.16582901421487
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200671.p1 GENE.R_Transcript_200671~~R_Transcript_200671.p1 ORF type:3prime_partial len:133 (-),score=13.62 R_Transcript_200671:3-398(-)
ATGGTTCTTCACCGAGCTCTGCCCTTAAATTGTCGTACGGATAGACCTTTGGTGCAAAAGGAATCTTGGAAGCCTTATCATTCCAGACAGCAGCCAAGCCTAGGGCAGCAAAGAAACTCAATCCTCCGCACAACCAACCCAATGCCTCATACTTGCCAACAGTGTCAGCGATGCGATCGATGCAAGGCTCGGGGAATGGGGTTCCGTTGTCCCACACTAGCTCATCGTTCGCCGGAAGCTGAAAAGTTTAGGGGGGAAAAAATTGAGAAATCAAATTCGGATTTTAAAGTGAAGGAAATCAGATTGAGAGAGAAAGAGAACGGCTTGTCAGGGACGAGGTGCTTGCCGACAGGGAGGCCCATCCCGGCACGTTGCCGGAGGGAGCATCCAATCGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200671.p1 GENE.R_Transcript_200671~~R_Transcript_200671.p1 ORF type:3prime_partial len:133 (-),score=13.62 R_Transcript_200671:3-398(-)
MVLHRALPLNCRTDRPLVQKESWKPYHSRQQPSLGQQRNSILRTTNPMPHTCQQCQRCDRCKARGMGFRCPTLAHRSPEAEKFRGEKIEKSNSDFKVKEIRLREKENGLSGTRCLPTGRPIPARCRREHPIE

Click here to download the sequence:
Link to NCBI Protein BLAST