Transcript Information: R_Transcript_200692.p1


Annotated TAIR IDAT5G19020.1
Annotated Gene Namemitochondrial editing factor 18
Annotated Gene Symbol(s)MEF18
Annotation TypeOrtholog
Chromosome Positionchr5:6352771-6354828 | Reverse length=685
E-Value2.9E-261
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.891763460293
Replicate 20.70575799718649
Replicate 31.9891004635314
Condition 2: 8 Hour
Replicate 11.8518721388673
Replicate 21.409299275705
Replicate 32.7710441983504
Condition 3: 24 Hour
Replicate 12.2507654144808
Replicate 22.2240597200582
Replicate 33.09615990669


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200692.p1 GENE.R_Transcript_200692~~R_Transcript_200692.p1 ORF type:complete len:714 (+),score=127.56,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|8.2e-10,PPR_2|PF13041.2|0.97,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|7.9e-07,PPR_2|PF13041.2|7.5e+02,PPR_2|PF13041.2|6e-07,PPR_2|PF13041.2|9.1e-10,PPR_2|PF13041.2|22,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|0.064,PPR_2|PF13041.2|6.5,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|3.7e+02,PPR|PF01535.16|0.13,PPR|PF01535.16|6.5e-10,PPR|PF01535.16|6.8e-06,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|0.49,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|0.0004,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|0.81,PPR|PF01535.16|6.8,PPR|PF01535.16|0.38,PPR|PF01535.16|0.013,PPR|PF01535.16|4.9e+02,PPR|PF01535.16|29,PPR_1|PF12854.3|5.4,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|2e+02,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|3.4e-07,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|6.7e-06,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|62,PPR_1|PF12854.3|7.1e+03,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.09,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|1.3e+02,PPR_3|PF13812.2|68,PPR_3|PF13812.2|2.5e-06,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|51,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|69,PPR_3|PF13812.2|28,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|71,TPR_19|PF14559.2|32,TPR_19|PF14559.2|8e+03,TPR_19|PF14559.2|9.4,TPR_19|PF14559.2|4.5e+02,TPR_19|PF14559.2|7.2e+02,TPR_19|PF14559.2|87,TPR_19|PF14559.2|3 R_Transcript_200692:169-2310(+)
ATGTACAAACCTCTCAGACACAAAACCCTGCTCCAATTGCTAGCGCCATTTCCTTCTTCCTCTTCTCCAATTCCCTCATGGGCTTCTTCTTTTTCTACCAAATCTTCTCAAAATGTAGCCAACCCAAAAACCCATCTCATAAACTTCTTCAATTCTCTGAACAATCAGAATCCAAACCCAAAGTCAAATGGAGGGCCCAAATCTGATCATGAACTTGAATTAGTTTCTGCCCTGAAATCCTGTTCAACCCTTAAGGCAGTTTCTCAAGGGCAACAAATACATTCACTTATCTTGAAAACAGGTCTTGACTCCAATATATTTATACAGAACAGTTTGATTAGTATGTATGCTAAATGTGGCCAAATGGGTGTTGCCCAGATGTTATTTGATATGAGTTCTGGGTTTGATGTGGTATCTTGGAATATTATGTTGAGTGCTTATGTCAAATGTGGTCGGTTAAGCGATGCCCGCCAACTGTTCGATGAAATGCCTGAGAGAGGTTGTGTTGCTTATACCACTATGATAATTGGTTTGGCTCAGAATGATAGGTGGGGTCAAGCTATTGAAGTTTTTAAGGATATGAGGGTTGCGGGGGTTACTCCGAATGAGGTGACAATGGCTAGTGTCATTTCGTCGTACACTAATGTAGATAGGATTATGAGTTCTAGAGAGTTGCATTCATTGGCTATCAAACTTGGGCTTAAGGATTTTGTTGTTGTTGCGACTAATCTGTTGCATATATACTGTATTTCTTCGGGTTTAGGGGATGCAAGGAGGTTATTTGATAAGATGCCAGAGAAGAATGTAGTTTCTTGGAATGTGATGTTGAATGGATATTCAAAAAATGGTCTACTTGATAAGGCCAGAGAGTTGTTTGATAAGATTCCTGAGAAGGATGTGGTGTCTTGGGGCACCATTATTGATGCGTATGTACAAGTAGATAGATTGGTTGAAGCTTTGATGTTGTATCGTGCTATGTTGTGTGCAGGATTGAGGCCTAATGATGTTATGATTGTGGATTTAGTCTCAGCTTGTGGAAGAAGAATGGCAATTGGTGAGGGTCAGCAACTGCATTCTACTGCAGTAAAGATTGGCTTTGACTGCTTTGATTTTGTTCAGTCAACCATAATTCACTTCTATGCAACTTGTCGGATGATGGACCAGGCTTGTTCACAATTCGTGGTGGCGAGTAAAGCCCATATTGCATCATGGAATGCTCTTATCACAGGATTTGTTAAGAATGGAATGGTTAACCAAGCTAGGCAAGTTTTCGACGAGATGCCTGAAAGAGATGTTTTCTCTTGGAGCTCCATTATTTCTGGTTATTCGCAGGTTGGACAAGCCAGTATGGCTTTAGGGTTGTTCCAAAGTATGGTGGCTTCCGGTATCCAGCCAAATGAGATCACTATGGTCAGTGTCCTTTCTGCGATTGCGACTTTAGGTACATTAAAAGATGCGAAGTGGGCCCATGAATATATCAGAAGGAACTCTATTCCTCTTAATGACAATTTAACTGCAGCACTTGTTGATGTTTATGCCAAATGTGGGAGCATTAGTAACGCCTTAGATGTGTTTAATCAAGTTCAAGTAAGATTCACTACTGTCTCACCATGGAATGCAATTATATGTGGATTGGCAATTCATGGGCATGCTACTTTGGCATTAACGAAATTTGAAGACTTGGAAAGGACTGGCATACGACCCAATTCAATCACTTTTATTGGTGTCCTGACTGCTTGTTGCCATGCTGGGCTGGTAGAAGCAGGAGAAAATTTTTTTGACGGGATGAAGAATGTGTATAAGATAGAACCCAGCATTAAGCATTATGGTTGTATGGTTGACCTCCTAGGTAGAACTGGACGTTTGAAAGAAGCTGAGAAAATGATAAGGAGCATGCCAATGGAGGCAGATGTGGTTATATGGGGTACTTTACTTGCAGCTTGTAGAACACATGGCAATGTGGAGATAGGAGAGCTAGCAGCCAAAAGGTTGGCGAACTTGGATACATCTCATGGGGCAAGTAGGGTTTTGCTGTCCAACCTTTATGCAGATGCAGGAAGATGGGATGATGCACTTGTGGTTAGAAAAGCCATGCAAGGTCAGCCGATGGTAAGGTTGCCTGGTGCTAGTGGCGTTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200692.p1 GENE.R_Transcript_200692~~R_Transcript_200692.p1 ORF type:complete len:714 (+),score=127.56,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|8.2e-10,PPR_2|PF13041.2|0.97,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|7.9e-07,PPR_2|PF13041.2|7.5e+02,PPR_2|PF13041.2|6e-07,PPR_2|PF13041.2|9.1e-10,PPR_2|PF13041.2|22,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|0.064,PPR_2|PF13041.2|6.5,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|3.7e+02,PPR|PF01535.16|0.13,PPR|PF01535.16|6.5e-10,PPR|PF01535.16|6.8e-06,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|0.49,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|0.0004,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|0.81,PPR|PF01535.16|6.8,PPR|PF01535.16|0.38,PPR|PF01535.16|0.013,PPR|PF01535.16|4.9e+02,PPR|PF01535.16|29,PPR_1|PF12854.3|5.4,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|2e+02,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|3.4e-07,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|6.7e-06,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|62,PPR_1|PF12854.3|7.1e+03,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.09,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|1.3e+02,PPR_3|PF13812.2|68,PPR_3|PF13812.2|2.5e-06,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|51,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|69,PPR_3|PF13812.2|28,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|71,TPR_19|PF14559.2|32,TPR_19|PF14559.2|8e+03,TPR_19|PF14559.2|9.4,TPR_19|PF14559.2|4.5e+02,TPR_19|PF14559.2|7.2e+02,TPR_19|PF14559.2|87,TPR_19|PF14559.2|3 R_Transcript_200692:169-2310(+)
MYKPLRHKTLLQLLAPFPSSSSPIPSWASSFSTKSSQNVANPKTHLINFFNSLNNQNPNPKSNGGPKSDHELELVSALKSCSTLKAVSQGQQIHSLILKTGLDSNIFIQNSLISMYAKCGQMGVAQMLFDMSSGFDVVSWNIMLSAYVKCGRLSDARQLFDEMPERGCVAYTTMIIGLAQNDRWGQAIEVFKDMRVAGVTPNEVTMASVISSYTNVDRIMSSRELHSLAIKLGLKDFVVVATNLLHIYCISSGLGDARRLFDKMPEKNVVSWNVMLNGYSKNGLLDKARELFDKIPEKDVVSWGTIIDAYVQVDRLVEALMLYRAMLCAGLRPNDVMIVDLVSACGRRMAIGEGQQLHSTAVKIGFDCFDFVQSTIIHFYATCRMMDQACSQFVVASKAHIASWNALITGFVKNGMVNQARQVFDEMPERDVFSWSSIISGYSQVGQASMALGLFQSMVASGIQPNEITMVSVLSAIATLGTLKDAKWAHEYIRRNSIPLNDNLTAALVDVYAKCGSISNALDVFNQVQVRFTTVSPWNAIICGLAIHGHATLALTKFEDLERTGIRPNSITFIGVLTACCHAGLVEAGENFFDGMKNVYKIEPSIKHYGCMVDLLGRTGRLKEAEKMIRSMPMEADVVIWGTLLAACRTHGNVEIGELAAKRLANLDTSHGASRVLLSNLYADAGRWDDALVVRKAMQGQPMVRLPGASGVA*

Click here to download the sequence:
Link to NCBI Protein BLAST