Transcript Information: R_Transcript_200943.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.584094750551
Replicate 20.16797040333038
Replicate 30.36650780153844
Condition 2: 8 Hour
Replicate 10.78354767831185
Replicate 20.17888705472948
Replicate 30.43563865488929
Condition 3: 24 Hour
Replicate 10
Replicate 20.70576828449847
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200943.p1 GENE.R_Transcript_200943~~R_Transcript_200943.p1 ORF type:internal len:125 (+),score=31.65,RVT_2|PF07727.10|5.8e-09 R_Transcript_200943:2-373(+)
GATGTACAAGAGGAAGAATCTCCAATTCAGGGGGAGCAATCAACACCACAAGTTGAGGAGCTAACACTTAGAAGATCAACCAGAGTTCGACAACCTTCAAGACTTTATATAAGCTCAGATTATATTCTTGTCACTGATGACGAGGAGCCAGAGAGTTTCCAAGAAGCATTGTCACACCCCGACAAGAATCATTGGGTTGACGTCATGAAAGAAGAGATGGATTCTTTAATAAAGAATGAAACCTATGAATTGGTGAAGCGTCCTAAAGGGAAGAAAGTCTTGAAGAATAGGTGGGTCCTGAAGAATAAGAGAGATGGCAAGAAGTTATTGAAGTGGAAGGCAAGATTAGTAATGAGGGGATGCCACCAAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200943.p1 GENE.R_Transcript_200943~~R_Transcript_200943.p1 ORF type:internal len:125 (+),score=31.65,RVT_2|PF07727.10|5.8e-09 R_Transcript_200943:2-373(+)
DVQEEESPIQGEQSTPQVEELTLRRSTRVRQPSRLYISSDYILVTDDEEPESFQEALSHPDKNHWVDVMKEEMDSLIKNETYELVKRPKGKKVLKNRWVLKNKRDGKKLLKWKARLVMRGCHQK

Click here to download the sequence:
Link to NCBI Protein BLAST