Transcript Information: R_Transcript_200951.p1


Annotated TAIR IDATMG00240.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF111A
Annotation TypeHomolog
Chromosome PositionchrM:68918-69253 | Reverse length=111
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37250940723916
Replicate 20.21424796343161
Replicate 30.2337422203689
Condition 2: 8 Hour
Replicate 10.49971152953562
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.93705335623282
Replicate 20
Replicate 30.67003177612951


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200951.p1 GENE.R_Transcript_200951~~R_Transcript_200951.p1 ORF type:5prime_partial len:98 (+),score=14.94 R_Transcript_200951:3-296(+)
TTGATGTATGCCATGGTGTGTACAAGACCAGATATAGCACATGCTGTTGGTGTAGTTAGTGGATTCTTAGCTAATCTAGGTAAGGTTCACTGGGAAGCTGTAAAGTGGATCATGAGATTTTTGCGGGGTACTTCAAAATTGAGTTTGTGTTTTAGAGTTGGTGAGCCTATTCTTGAGGGATTTACAGATGCTGACATGGCTAGTGATCTTGACAACAGAAAGTCTGTCTTGAGTTACTTGTTTAAATTTGCAGGGGAGCCATTTCATGGCAATCCAAGTTACAGAAGTGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200951.p1 GENE.R_Transcript_200951~~R_Transcript_200951.p1 ORF type:5prime_partial len:98 (+),score=14.94 R_Transcript_200951:3-296(+)
LMYAMVCTRPDIAHAVGVVSGFLANLGKVHWEAVKWIMRFLRGTSKLSLCFRVGEPILEGFTDADMASDLDNRKSVLSYLFKFAGEPFHGNPSYRSV*

Click here to download the sequence:
Link to NCBI Protein BLAST