Transcript Information: R_Transcript_201.p1


Annotated TAIR IDAT3G09180.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2819278-2821096 | Forward length=402
E-Value2.7E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7519874018368
Replicate 23.6270981254432
Replicate 33.5669859030505
Condition 2: 8 Hour
Replicate 16.2555129427269
Replicate 25.277385738674
Replicate 36.4921819007223
Condition 3: 24 Hour
Replicate 14.4686729396991
Replicate 24.1856695704745
Replicate 35.1124565692023


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_201.p1 GENE.R_Transcript_201~~R_Transcript_201.p1 ORF type:5prime_partial len:411 (+),score=78.56,Med27|PF11571.4|9.2e-27 R_Transcript_201:2-1234(+)
CAACAACAACAACAACAACAACAACAACCTCTACAAACACCGCCGCAAACGACGTCGTCGTCACCGTCTCCGCCAGAAACCACCGGAGAAGCGCCGCCGAAACAGGTCGCAACGGCGATGGATCGCCTCGGCGAAGCCGCTCGTCTTATCGCCGACATTCGGCTGGGCGCTGATCGCCTTCTTGAAGCCTTGTTTATTTCCTCCGAAACTCATCAGTCTTCCAAAACTCTCAATTTGATTCTTAAAGAAGAGTCTTCTATGCGACAATACCTCCAGGATCTTCGTGATATCGGAAGGCAACTTGAGAATTCTGGGGTTCTCAGTGAAGCGCTACGATCTCGAAGCAATTCTTGGGGATTGCACATGCCTTTGGTTTGTCCAGATGGTGCAGTTGTTGCATATGCATGGAAGAGGCAACTTGCTGGCCAGGCTGGTGCTTCTGCTGTTGACAGGACTAGACTAGCTCTGAAGTCCTTCATGGATCAGAGACGTAGGTTTTTTCCTCACCTTGACTCTGAATCAGCCTCAAAGAAACAACGCGTTTCTGAAGAAGCTTTGGAGAACCTAGAAGAACTTAGCGAGTACAAAACACTGGCAGATATCATAAAATGTCTTGAGAAAGAAGTGCCCAGCTTGAAGATTTGCACTTATGTAAGGTTGGAGTGGTTGGATAAAGCTGCTTCACTTCCTGCTTCAGAAAGTGACAGTTCTTTTGATACACCAATGGAGCATGATCATGATGCAAGAACTGGATCCTTTGGTGGTGTTCCTTCAGATAAAGTTGCTGTGATTGAGTTGTTGATACCTTCTGTCTTTAGAGCTATTGTTTCAGTACACCCTGTTGGTTCCACAGATCCTGATGCAGTAGCCTTCTTTTCACCTGATGAGGGAGGAAGTTATGTTCATGCTAGAGGTTTATCAGTTTATCATGTATTTAGGCATATTACGGAACTATCAAATATAGCTTTGCAACATTTTCTTGGAAATAAATCAGAGGTGGCCCTGTACTTTCTTCTGCAATGGATCAGCAGCTACCAAAGTCTATTTACCCAAGCGTGCAGCAAATGTGGACGGCTATTATCATTGGATAAACAATCAGCACTTTTATTGCCTCCAGTGCATCGTCCCTATCGGGACCTCTCTGCGGATAACACTGCATCAACCTCACTAAAGGATCAGAGTTCAAACACAGTGCAAGCGTATCATGTCAGCTGCTCTCCACCAGATATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_201.p1 GENE.R_Transcript_201~~R_Transcript_201.p1 ORF type:5prime_partial len:411 (+),score=78.56,Med27|PF11571.4|9.2e-27 R_Transcript_201:2-1234(+)
QQQQQQQQQPLQTPPQTTSSSPSPPETTGEAPPKQVATAMDRLGEAARLIADIRLGADRLLEALFISSETHQSSKTLNLILKEESSMRQYLQDLRDIGRQLENSGVLSEALRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFMDQRRRFFPHLDSESASKKQRVSEEALENLEELSEYKTLADIIKCLEKEVPSLKICTYVRLEWLDKAASLPASESDSSFDTPMEHDHDARTGSFGGVPSDKVAVIELLIPSVFRAIVSVHPVGSTDPDAVAFFSPDEGGSYVHARGLSVYHVFRHITELSNIALQHFLGNKSEVALYFLLQWISSYQSLFTQACSKCGRLLSLDKQSALLLPPVHRPYRDLSADNTASTSLKDQSSNTVQAYHVSCSPPDI*

Click here to download the sequence:
Link to NCBI Protein BLAST