Transcript Information: R_Transcript_20130.p1


Annotated TAIR IDAT2G40640.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16961323-16963198 | Reverse length=383
E-Value2.9E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2803439435594
Replicate 21.1318760332236
Replicate 33.4576207692306
Condition 2: 8 Hour
Replicate 18.1179552250975
Replicate 27.172358326418
Replicate 38.4642281329567
Condition 3: 24 Hour
Replicate 13.7128529209225
Replicate 21.8428922523124
Replicate 34.3067451270714


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20130.p1 GENE.R_Transcript_20130~~R_Transcript_20130.p1 ORF type:5prime_partial len:371 (+),score=97.79 R_Transcript_20130:3-1115(+)
AATATCTTTGTGTCACTCATTCCCCTCTTACCCTTTCATTTGTTACCCCAAAGAATCAAACTTTACCTTCAAAGACCAATTCTTGATGATACCCACATAGCAAAATCAAACCCTTTCTCTCTTCAACCCAATACCCACAATTTATTTCCTCAAAAAGATCAAATCTTTAAGCAAAAAATGGCATCAGAGGAAGTGGATTTAGTCCCAACAGCACAAGGAATAAACAACAGCTTGAACCCCCAGCTCCTTTTCCAAGAACAAAACCCACTTCGGTTCAACCGGGCAGTGGGTGACCCGGGTCTGGGTCCCAAAACCCGGGAGCTTGGTGGGTTTATGGATGACAAGACGTTTGCTGTTGATCACCGGGATTGGTACTTCTCGCCGGAGTATCGCCGGAGTGGTGGTGGGGTCTTTGGGGAGGGTACCGGGCCCCACAGGCGGAGCTGGAATGGTGGCGGGTCCGGTTCGACCCCGAGTAGTGGGGAGGATGAGGATGAGGATGATGATGATGATGAGGTGGAGGATGATGAGGATGATAATGGTGAAGTTGAGGGTTTGGTTGGAATTAATGATAATAGTGGTGTTAGGAAGGGTAGTAATAATAGTAGTGATGGTGGAGGTGGTGTCAGTGGCAGTGTTGGGGAAAAGGTTGGGGTTGGAAGTGATAAGAACCATGCTACATTTGGGTCACCTAGTAGGCAAGTAGTTGTGAAGGATGGGAGCCTTTTGCAGGCAGGTGGTGATGCAAATAGAGGGAGTTCAAGTGAAAATGGTCAGCAGCAAGGAAGAGTAGGGCAGTTTCAAAAGATGGTTACAATTGCGGAACATGATGGTGAAATGTACTATTCACAGTTGTTGCAGGGAACAGAAGGGTCCAGCCATGGTCACAAGGATATATCTGGGGATAATGGATGTGGATTCAGTGGAAGAAAGGAGGGTTCAGTCTCTAGTGATCCTGGAGAGTCGTTAAGAGCAATTTTATCAGATCCTATCACGGGAGCTCTTATGGATGATGCCATGATATTACCGTGTGGACACTCTTTTGGATGTGGTGGAATACAACAAGTCATGAAAATGGTCAGTCTCCCAAAACCTTACTCAAGAAACAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20130.p1 GENE.R_Transcript_20130~~R_Transcript_20130.p1 ORF type:5prime_partial len:371 (+),score=97.79 R_Transcript_20130:3-1115(+)
NIFVSLIPLLPFHLLPQRIKLYLQRPILDDTHIAKSNPFSLQPNTHNLFPQKDQIFKQKMASEEVDLVPTAQGINNSLNPQLLFQEQNPLRFNRAVGDPGLGPKTRELGGFMDDKTFAVDHRDWYFSPEYRRSGGGVFGEGTGPHRRSWNGGGSGSTPSSGEDEDEDDDDDEVEDDEDDNGEVEGLVGINDNSGVRKGSNNSSDGGGGVSGSVGEKVGVGSDKNHATFGSPSRQVVVKDGSLLQAGGDANRGSSSENGQQQGRVGQFQKMVTIAEHDGEMYYSQLLQGTEGSSHGHKDISGDNGCGFSGRKEGSVSSDPGESLRAILSDPITGALMDDAMILPCGHSFGCGGIQQVMKMVSLPKPYSRNN*

Click here to download the sequence:
Link to NCBI Protein BLAST