Transcript Information: R_Transcript_20134.p1


Annotated TAIR IDAT5G05230.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1551593-1553543 | Forward length=363
E-Value7E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9128794711129
Replicate 25.4037629755109
Replicate 36.0304574418162
Condition 2: 8 Hour
Replicate 110.631387334659
Replicate 210.104131283836
Replicate 310.448766034918
Condition 3: 24 Hour
Replicate 15.0065159180259
Replicate 24.3330567564985
Replicate 35.9771924390545


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20134.p1 GENE.R_Transcript_20134~~R_Transcript_20134.p1 ORF type:complete len:509 (+),score=131.43,U-box|PF04564.11|1.3e+03,U-box|PF04564.11|1.1e-06 R_Transcript_20134:180-1529(+)
ATGGCATCAGAGGAAGTGGATTTAGTCCCAACAGCACAAGGAATAAACAACAGCTTGAACCCCCAGCTCCTTTTCCAAGAACAAAACCCACTTCGGTTCAACCGGGCAGTGGGTGACCCGGGTCTGGGTCCCAAAACCCGGGAGCTTGGTGGGTTTATGGATGACAAGACGTTTGCTGTTGATCACCGGGATTGGTACTTCTCGCCGGAGTATCGCCGGAGTGGTGGTGGGGTCTTTGGGGAGGGTACCGGGCCCCACAGGCGGAGCTGGAATGGTGGCGGGTCCGGTTCGACCCCGAGTAGTGGGGAGGATGAGGATGAGGATGATGATGATGATGAGGTGGAGGATGATGAGGATGATGGTGACGAGGATGATAATGGTGAAGTTGGGGGTTTGATTGGAATTGATGATAATAGTGGTGTTAGGAAGGGTAGTAATAATAGTAGTGATGGTGGAGGTGGTGTCAGTGGCAGTGTTGGGGAAAAGGTTGGGGTTGGAAGTGATAAGAACCATGCTACATTTGGGTCACCTAGTAGGCAAGTAGTTGTGAAGGATGGGAGCCTTTTGCAGGCAGGTGGTGATGCAAATAGAGGGAGTTCAAGTGAAAATGGTCAGCAGCAAGGAAGAGTAGGGCAGTTTCAAAAGATGGTTACAATTGCGGAACATGATGGTGAAATGTACTATTCACAGTTGTTGCAGGGAACAGAAGGGTCCAGCCATGGTCACAAGGATATATCTGGGGATAATGGATGTGGATTCAGTGGAAGAAAGGAGGGTTCAGTCTCTAGTGATCCTGGAGAGTCGTTAAGAGCAATTTTATCAGATCCTATCACGGGAGCTCTTATGGATGATGCCATGATATTACCGTGTGGACACTCTTTTGGACGTGGTGGAATACAACAAGTCATCAAAATGAAAGCTTGCTATACTTGTTCTCGCCCTGTCTCAGAAGACTCAGTGGCTCCCAATCTCTCCCTTCGAGTTGCTATTCAAGCATTTCTCCGTGAAGAAGATATGCAGTATAAAGCTTCCAAAAGGAGGAGAGAGAGGTTTGAACAGGAAAAGGGTAACTATAGTGATTCACCTTTCATAGATACGCCAAGAGCTAGAGGTGTGCAGTTTCCTTTCGCTGTGACTGATCGGGTCATGATAAAGGGGAACAAGAGGACACCTCAGCGCTTTGTAGGACGAGAGGCCGTTGTTACAACACAATGCTTGAATGGATGGTATGTGGTGAAGACTCTGGACAATGCTGAGAGTGTGAAGTTGCAATATAGATCGCTTGAAAAGGTTTCGGACAATCCTTCATCAAAGCCAACATTGGAGAAGTTAACACCAAACTGGTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20134.p1 GENE.R_Transcript_20134~~R_Transcript_20134.p1 ORF type:complete len:509 (+),score=131.43,U-box|PF04564.11|1.3e+03,U-box|PF04564.11|1.1e-06 R_Transcript_20134:180-1529(+)
MASEEVDLVPTAQGINNSLNPQLLFQEQNPLRFNRAVGDPGLGPKTRELGGFMDDKTFAVDHRDWYFSPEYRRSGGGVFGEGTGPHRRSWNGGGSGSTPSSGEDEDEDDDDDEVEDDEDDGDEDDNGEVGGLIGIDDNSGVRKGSNNSSDGGGGVSGSVGEKVGVGSDKNHATFGSPSRQVVVKDGSLLQAGGDANRGSSSENGQQQGRVGQFQKMVTIAEHDGEMYYSQLLQGTEGSSHGHKDISGDNGCGFSGRKEGSVSSDPGESLRAILSDPITGALMDDAMILPCGHSFGRGGIQQVIKMKACYTCSRPVSEDSVAPNLSLRVAIQAFLREEDMQYKASKRRRERFEQEKGNYSDSPFIDTPRARGVQFPFAVTDRVMIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLEKVSDNPSSKPTLEKLTPNWL*

Click here to download the sequence:
Link to NCBI Protein BLAST