Transcript Information: R_Transcript_20136.p1


Annotated TAIR IDAT5G05230.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1551593-1553543 | Forward length=363
E-Value9E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8538163469636
Replicate 22.5151818207024
Replicate 32.0878536871493
Condition 2: 8 Hour
Replicate 15.1649871373095
Replicate 22.7368787670201
Replicate 34.1124742811814
Condition 3: 24 Hour
Replicate 12.0925084712751
Replicate 22.5846006512395
Replicate 31.3679815429311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20136.p1 GENE.R_Transcript_20136~~R_Transcript_20136.p1 ORF type:5prime_partial len:384 (+),score=127.74,U-box|PF04564.11|6.9e-07 R_Transcript_20136:1-1152(+)
GATGAAGAAGGTGAAGGATCAGATAAGGAGATGGGAGTTGATGAGGATGATGCGGATGATGCTGACAGTGAGCAGCTAAAACGTTTGGCTGCACGGGCTAAAGCTTTCCGACAAGAGGATGAGGATGATGATGATGACGAGGTGGAGGATGATGAGGATGATGGTGACGAGGATGATAATGGTGAAGTTGGGGGTTTGATTGGAATTGATGATAATAGTGGTGTTAGGAAGGATAGTAATAATTGTAGTGATGGTGGAGGTGGTGTTAGTGGCAGTGTTGAGGATAAAGTTGGGGTTGGAAGTGATAAGAACCATGCTACATTTGGGTCACCAAGTAGGCAAGTGGTTGTGAAGGATGGGAGCCTTTTACAGGCAGGTGGTGATGCAAATAGAGGGAGTTCAAGTGAAAATGGTCAGCAGCAAGGAAGAGTAGGGCAGTTTCAAAAGATGGTTACAATTGCGGAACATGATGGTGAAATGTACTATTCACAGTTGTTGCAGGGAACAGAAGGGTCCAGCCATGGTCACAAGGATATATCTGGGGATAATGGATGTGGATTCAGTGGAAGAAAGGAGGGTTCAGTCTCTAGTGATCCTGGAGAGTCGTTAAGAGCAATTTTATCAGATCCTATCACGGGAGCTCTTATGGATGATGCCATGATATTACCGTGTGGACACTCTTTTGGACGTGGTGGAATACAACAAGTCATCAAAATGAAAGCTTGCTATACTTGTTCTCGCCCTGTCTCAGAAGACTCAGTGGCTCCCAATCTCTCCCTTCGAGTTGCTATTCAAGCATTTCTCCGTGAAGAAGATATGCAGTATAAAGCTTCCAAAAGGAGGAGAGAGAGGTTTGAACAGGAAAAGGGTAACTATAGTGATTCACCTTTCATAGATACGCCAAGAGCTAGAGGTGTGCAGTTTCCTTTCGCTGTGACTGATCGGGTCATGATAAAGGGGAACAAGAGGACACCTCAGCGCTTTGTAGGACGAGAGGCCATTGTTACAGCACAATGTTTGAATGGATGGTATGTGGTCAAGACTCTGGACAATGCAGAGAGTGTGAAGTTGCAATATAGATCGCTTGAAAAGGTTTCGGACAATCCTTCATCAAAGCCAACATTGGAGAAGTTAACACCAAACTGGTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20136.p1 GENE.R_Transcript_20136~~R_Transcript_20136.p1 ORF type:5prime_partial len:384 (+),score=127.74,U-box|PF04564.11|6.9e-07 R_Transcript_20136:1-1152(+)
DEEGEGSDKEMGVDEDDADDADSEQLKRLAARAKAFRQEDEDDDDDEVEDDEDDGDEDDNGEVGGLIGIDDNSGVRKDSNNCSDGGGGVSGSVEDKVGVGSDKNHATFGSPSRQVVVKDGSLLQAGGDANRGSSSENGQQQGRVGQFQKMVTIAEHDGEMYYSQLLQGTEGSSHGHKDISGDNGCGFSGRKEGSVSSDPGESLRAILSDPITGALMDDAMILPCGHSFGRGGIQQVIKMKACYTCSRPVSEDSVAPNLSLRVAIQAFLREEDMQYKASKRRRERFEQEKGNYSDSPFIDTPRARGVQFPFAVTDRVMIKGNKRTPQRFVGREAIVTAQCLNGWYVVKTLDNAESVKLQYRSLEKVSDNPSSKPTLEKLTPNWL*

Click here to download the sequence:
Link to NCBI Protein BLAST