Transcript Information: R_Transcript_201405.p1


Annotated TAIR IDAT3G59850.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22109343-22111566 | Reverse length=388
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8612032788828
Replicate 22.4226500480344
Replicate 32.4228280149777
Condition 2: 8 Hour
Replicate 11.1772050455406
Replicate 23.6551441471169
Replicate 33.4906943500744
Condition 3: 24 Hour
Replicate 13.0904740498832
Replicate 21.908628173223
Replicate 33.7882565804245


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_201405.p1 GENE.R_Transcript_201405~~R_Transcript_201405.p1 ORF type:3prime_partial len:104 (+),score=4.11,Glyco_hydro_28|PF00295.13|1.8e-12 R_Transcript_201405:135-443(+)
ATGTTGCCCGTGGTCAACCGCCACTTGGCGTCATATCCGATGAGGAATACCAAAAAGTTGAAGTGGGTATCTGTTCATTTTCCCACTTCTTTTTCTCCCTGCAATTGCCGTCCCCGCAATTTCTCACCAAAACATTACTCTTCTCCACAATATCCATTCTCCAGTATAAGGAACGTGAAAGTGGAAGGAGTTAAGATCTCAGCTTCAGGTGCCAGCCCAAATACTGACGGAATTCATGTACAACTTTCAACTGGTGTAACAATCTTGAGCACCAATATTGCCGCTGGTGATGATTGTATCTTAATTCGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_201405.p1 GENE.R_Transcript_201405~~R_Transcript_201405.p1 ORF type:3prime_partial len:104 (+),score=4.11,Glyco_hydro_28|PF00295.13|1.8e-12 R_Transcript_201405:135-443(+)
MLPVVNRHLASYPMRNTKKLKWVSVHFPTSFSPCNCRPRNFSPKHYSSPQYPFSSIRNVKVEGVKISASGASPNTDGIHVQLSTGVTILSTNIAAGDDCILIR

Click here to download the sequence:
Link to NCBI Protein BLAST