Transcript Information: R_Transcript_20171.p1


Annotated TAIR IDAT3G54440.3
Annotated Gene Nameglycoside hydrolase family 2 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20148494-20157019 | Reverse length=1120
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6067747319295
Replicate 21.1828901642985
Replicate 30.69903189847414
Condition 2: 8 Hour
Replicate 10.91965689942705
Replicate 21.5747099888159
Replicate 31.2143683161526
Condition 3: 24 Hour
Replicate 10.53891566262216
Replicate 21.0872310720707
Replicate 30.61655506160274


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20171.p1 GENE.R_Transcript_20171~~R_Transcript_20171.p1 ORF type:3prime_partial len:852 (+),score=149.46,Glyco_hydro_2_C|PF02836.13|1.6e-99,Bgal_small_N|PF02929.13|2.6e-38,Glyco_hydro_2_N|PF02837.14|2.6e-15,Glyco_hydro_2|PF00703.17|1.1e-14,DUF4981|PF16353.1|2.3e-14 R_Transcript_20171:134-2686(+)
ATGTATGATCCACAAATTTTGATAACATTTCTCATAGCCAAATTATTTTCTAATCTCTCTATCTTTTTTCCTTGCTTAGTTCCTCCAGAACACCAATATTACAGAGAACTAAACAGAAAACGAAGTTCAAGACATGTCACAGTTCTCCGGTCAGTTGTCTCTCAAAGTCAGGATAACCGACTACCGGCTGAATTTAAATTCTCTGAATACTGTCATCCATGTGGTTCAGAAAAGACAAATGTTTTAGCAGTTCAAGTATTTAGATGGAGTGATGGCTCTTATCTTGAAGATCAAGATCATTGGTGGTTATCTGGTATCCATCGTGATGTGCTGCTTCTAGCAAAACCTCAGGTTTTCATTGCAGATTATACCTTTACATCGAACTTGGATGGGAGTTTTTCTCAAGCAGACTTACAAGTGGAGGTGAAAATTGACACTCCGCAAGGAATGTCTAGAGATTGCATCTTTACTGATTTTACTATTGAAGCTAAATTATATGACAACCAAAAGTGGCATGAACATGATGGAACCAGTGACCTGCTTAAATCTTTGGTTGCACAAATGGATCTTATTCCACCTGCAAGTTTCCGATTTCATGGATATCATTTTAAAGGAAAGATAGAGAGGCCAAGGCTTTGGTCTGCTGAACAACCAAATCTGTACACATTGGTCATCACTTTGAGAGATGAGTCTGGCCATGTGGTCGATTGTGAATCATGCCAAGTGGGTATTCGGCAAATAACGACAACTTATAAACAACTACTTGTTAATGGGCACCCTGTTGTAATTCGTGGGGTAAACAGACATGAGCACCACCCACGTCTCGGGAAGACAAACTTGGAATCATGCATGATTAAGGACTTGGTTTTGATGAAGCAAAATAATGTGAATGCTGTGAGAAACAGCCACTATCCCAACCATCCCCGGTGGTACGAGTTGTGCGATCTCTTTGGCATGTATATGATAGATGAAGCAAACATTGAGACTCATGGTTTCGATCATTCTGGTCCTTTTAAGCATCCTACAATGGAGCCAAGCTGGGCTGCTGCTATGTTGGACCGTGTTGTGGGCATGGTTGAGAGGGATAAAAACCATGCATGTATCATTTCTTGGTCCTTGGGAAATGAAGCTGGATATGGATCAAATCATTCTGCTTTGGCTGGTTGGATTAGAGGAAGAGATCATTCTAGGGTGATACATTATGAAGGAGGTGGATCCAGAACCTCGTCAACTGATATTATTTGTCCCATGTACATGCGTGTTTGGGACATAGTAAAGATTGCCAATGATCCAAATGAAGCAAGACCTCTTATATTGTGCGAGTATTCACATGCAATGGGAAACAGCAATGGCAATATAGATGAATATTGGGAAGCAATCGATAACACATTTGGACTTCAGGGAGGCTTCATATGGGATTGGGTTGATCAGGGGCTACTGAAGGAAGGTGCTTATGGTAAGAAGCACTGGGCTTATGGTGGTGATTTTGATGATACTCCCAATGATTTGAACTTCTGCATCAACGGACTTACATGGCCTGACAGAACTCCTCATCCTGCAGTACATGAAGTAAAATATGTTTACCAACCGATCAAAATTTCGTTCAAGGAAGGAATACTGAAGATAACAAATACTCACTTCTATGACACTACACAAGGGCTGGAATTCCATTGGACTCTTCGTGGGGATGGTTGTGAATTAGGATCTGGAGTATTCTCCGTGCCACAAGTTGAACCCCAGAGCAGTTTCTCTATGGAATGGATTTCTGGTCCTTGGTACTCACCTTGGACTTCATCTATTGCTGAGGAAAATTTCTTGACGATAACTGCAATGCTTCTTCACTCCACACGCTGGGTCGAAGCTGGTCATATTGTTTCGTCAGCACAAGTGCAATTGCCTCCAAAGAGAGAGATTGCTGCTCATGTAATCAATCCTAAGGATGCTGTCCTTCATACTGAAAGTTCTGGAGATCTGATAAAAATCATTCAACAGGATCTTAGTGAAATCATTTTTAACACTAGCACAGGGTATATTGAGAGCTGGAAGGTTCAAGGAACTCTTGTGATGAACAGAGGTATAGCTCCTTGCTTTTGGCGAGCTCCTACAGACAACGACAAAGGGGGCGAGGCCGAGAGTTACTTATCAAAGTGGAAAGCTTCTTGTTTAGATAATATTGTTTTCATCACTAAGAGCTGCTGCATTCAGAATAAGACAGATAATCTGGTAGAGGTAGCTGCAGTGTTTCTTGGAGTCCCAAGCACAGAGAAGAGTTCTGGGCTGCAGGAATCAAATGTTATTTTTACAGTCAAAATGACTTACTTGATTTATGGTGCCGGAGACATTATTATTCAAAGTAGTGTGGAACCTCGTTCTGATCTTCCACCTTTGCCTCGGATTGGAGTTGAGTTCTGTTTGCACAAAACAATGGATCAAGTTAAATGGTATGGCAAGGGACCATTTGAGTGTTATCCTGATAGGAAAGCAGCTGCCCAAGTAGCAATTTATGAGATGGCTGTTCATGAGATGCATGTTCCCTACATTGCTCCTGGGGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20171.p1 GENE.R_Transcript_20171~~R_Transcript_20171.p1 ORF type:3prime_partial len:852 (+),score=149.46,Glyco_hydro_2_C|PF02836.13|1.6e-99,Bgal_small_N|PF02929.13|2.6e-38,Glyco_hydro_2_N|PF02837.14|2.6e-15,Glyco_hydro_2|PF00703.17|1.1e-14,DUF4981|PF16353.1|2.3e-14 R_Transcript_20171:134-2686(+)
MYDPQILITFLIAKLFSNLSIFFPCLVPPEHQYYRELNRKRSSRHVTVLRSVVSQSQDNRLPAEFKFSEYCHPCGSEKTNVLAVQVFRWSDGSYLEDQDHWWLSGIHRDVLLLAKPQVFIADYTFTSNLDGSFSQADLQVEVKIDTPQGMSRDCIFTDFTIEAKLYDNQKWHEHDGTSDLLKSLVAQMDLIPPASFRFHGYHFKGKIERPRLWSAEQPNLYTLVITLRDESGHVVDCESCQVGIRQITTTYKQLLVNGHPVVIRGVNRHEHHPRLGKTNLESCMIKDLVLMKQNNVNAVRNSHYPNHPRWYELCDLFGMYMIDEANIETHGFDHSGPFKHPTMEPSWAAAMLDRVVGMVERDKNHACIISWSLGNEAGYGSNHSALAGWIRGRDHSRVIHYEGGGSRTSSTDIICPMYMRVWDIVKIANDPNEARPLILCEYSHAMGNSNGNIDEYWEAIDNTFGLQGGFIWDWVDQGLLKEGAYGKKHWAYGGDFDDTPNDLNFCINGLTWPDRTPHPAVHEVKYVYQPIKISFKEGILKITNTHFYDTTQGLEFHWTLRGDGCELGSGVFSVPQVEPQSSFSMEWISGPWYSPWTSSIAEENFLTITAMLLHSTRWVEAGHIVSSAQVQLPPKREIAAHVINPKDAVLHTESSGDLIKIIQQDLSEIIFNTSTGYIESWKVQGTLVMNRGIAPCFWRAPTDNDKGGEAESYLSKWKASCLDNIVFITKSCCIQNKTDNLVEVAAVFLGVPSTEKSSGLQESNVIFTVKMTYLIYGAGDIIIQSSVEPRSDLPPLPRIGVEFCLHKTMDQVKWYGKGPFECYPDRKAAAQVAIYEMAVHEMHVPYIAPGE

Click here to download the sequence:
Link to NCBI Protein BLAST