Transcript Information: R_Transcript_20174.p1


Annotated TAIR IDAT3G54440.3
Annotated Gene Nameglycoside hydrolase family 2 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20148494-20157019 | Reverse length=1120
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.382133885546
Replicate 29.9650031523335
Replicate 312.458050271592
Condition 2: 8 Hour
Replicate 18.840233789818
Replicate 211.232058838047
Replicate 312.972619224543
Condition 3: 24 Hour
Replicate 111.807477955523
Replicate 210.284308162273
Replicate 312.712249536527


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20174.p1 GENE.R_Transcript_20174~~R_Transcript_20174.p1 ORF type:5prime_partial len:1083 (+),score=200.96,Glyco_hydro_2_C|PF02836.13|2.6e-99,Bgal_small_N|PF02929.13|3.2e-69,Glyco_hydro_2_N|PF02837.14|1.8e-55,Glyco_hydro_2|PF00703.17|1.5e-14,DUF4981|PF16353.1|3.2e-14,DUF4981|PF16353.1|6.6e+03 R_Transcript_20174:2-3250(+)
AGAAAGAGAGAAGCACATGTTCCACTGCATTGTCATGACAAAGTAGAAGGATCTCTGAAATACTGGTATGAAAGAAGCAGGTTGGATTTCTCTGCATCAAATTTAGCCATCTGGAATAACGATGCTGTCTGTGCTGCTCTTGATTGTGCATCTTCCTGGGTTAAAGACTTGCCTTTTGTCAAGTCCTTATCTGGCTATTGGAAATTTCATTTGGCTTCTGGGCCAAGTAGTGTCCCATTAAACTTTCACCATAATGAATTCCATGACAATACTTGGGGAAATTTGCCAGTTCCTTCAAATTGGGAAATGCATGGATATGGTCAGCCCATCTACACAAACACGCAGTATCCATTCCCAGTCGATCCTCCTCATGTTCCCACAGAGAATCCCACAGGCTGCTACAGGACATACTTCCATATTCCCAATGAATGGAATGGTCGAAGGATATTGATACACTTTGAAGGTGTTGACTCTGCCTTTCATGTATGGGTAAATGGAGTCCCTGTAGGGTACAGTCAGGATAGTCGACTACCGGCTGAGTTTGAAATCACTGAATATTGTCATCCATGTGGTTCAGAAAAGACAAATGTTTTAGCAGTTCAAGTATTTAGATGGAGTGATGGCTCTTATCTTGAAGATCAAGATCATTGGTGGTTATCTGGTATCCATCGTGATGTGCTGCTTCTAGCAAAACCTCAGGTTTTCATTGCAGATTATACCTTTACATCGAACTTGGATGGGAGTTTTTCTCAAGCAGACTTACAAGTGGAGGTGAAAATTGACACTCCGCAAGGAATGTCTAGAGATTGCATCTTTACTGATTTTACTATTGAAGCTAAATTATATGACAACCAAAAGTGGCATGAACATGATGGAACCAGTGACCTGCTTAAATCTTTGGTTGCACAAATGGATCTTATTCCACCTGCAAGTTTCCGATTTCATGGATATCATTTTAAAGGAAAGATAGAGAGGCCAAGGCTTTGGTCTGCTGAACAACCAAATCTGTACACATTGGTCATCACTTTGAGAGATGAGTCTGGCCATGTGGTCGATTGTGAATCATGCCAAGTGGGTATTCGGCAAATAACGACAACTTATAAACAACTACTTGTTAATGGGCACCCTGTTGTAATTCGTGGGGTAAACAGACATGAGCACCACCCACGTCTCGGGAAGACAAACTTGGAATCATGCATGATTAAGGACTTGGTTTTGATGAAGCAAAATAATGTGAATGCTGTGAGAAACAGCCACTATCCCAACCATCCCCGGTGGTACGAGTTGTGCGATCTCTTTGGCATGTATATGATAGATGAAGCAAACATTGAGACTCATGGTTTCGATCATTCTGGTCCTTTTAAGCATCCTACAATGGAGCCAAGCTGGGCTGCTGCTATGTTGGACCGTGTTGTGGGCATGGTTGAGAGGGATAAAAACCATGCATGTATCATTTCTTGGTCCTTGGGAAATGAAGCTGGATATGGATCAAATCATTCTGCTTTGGCTGGTTGGATTAGAGGAAGAGATCATTCTAGGGTGATACATTATGAAGGAGGTGGATCCAGAACCTCGTCAACTGATATTATTTGTCCCATGTACATGCGTGTTTGGGACATAGTAAAGATTGCCAATGATCCAAATGAAGCAAGACCTCTTATATTGTGCGAGTATTCACATGCAATGGGAAACAGCAATGGCAATATAGATGAATATTGGGAAGCAATCGATAACACATTTGGACTTCAGGGAGGCTTCATATGGGATTGGGTTGATCAGGGGCTACTGAAGGAAGGTGCTTATGGTAAGAAGCACTGGGCTTATGGTGGTGATTTTGATGATACTCCCAATGATTTGAACTTCTGCATCAACGGACTTACATGGCCTGACAGAACTCCTCATCCTGCAGTACATGAAGTAAAATATGTTTACCAACCGATCAAAATTTCGTTCAAGGAAGGAATACTGAAGATAACAAATACTCACTTCTATGACACTACACAAGGGCTGGAATTCCATTGGACTCTTCGTGGGGATGGTTGTGAATTAGGATCTGGAGTATTCTCCGTGCCACAAGTTGAACCCCAGAGCAGTTTCTCTATGGAATGGATTTCTGGTCCTTGGTACTCACCTTGGACTTCATCTATTGCTGAGGAAAATTTCTTGACGATAACTGCAATGCTTCTTCACTCCACACGCTGGGTCGAAGCTGGTCATATTGTTTCGTCAGCACAAGTGCAATTGCCTCCAAAGAGAGAGATTGCTGCTCATGTAATCAATCCTAAGGATGCTGTCCTTCATACTGAAAGTTCTGGAGATCTGATAAAAATCATTCAACAGGATCTTAGTGAAATCATTTTTAACACTAGCACAGGGTATATTGAGAGCTGGAAGGTTCAAGGAACTCTTGTGATGAACAGAGGTATAGCTCCTTGCTTTTGGCGAGCTCCTACAGACAACGACAAAGGGGGCGAGGCCGAGAGTTACTTATCAAAGTGGAAAGCTTCTTGTTTAGATAATATTGTTTTCATCACTAAGAGCTGCTGCATTCAGAATAAGACAGATAATCTGGTAGAGGTAGCTGCAGTGTTTCTTGGAGTCCCAAGCACAGAGAAGAGTTCTGGGCTGCAGGAATCAAATGTTATTTTTACAGTCAAAATGACTTACTTGATTTATGGTGCCGGAGACATTATTATTCAAAGTAGTGTGGAACCTCGTTCTGATCTTCCACCTTTGCCTCGGATTGGAGTTGAGTTCTGTTTGCACAAAACAATGGATCAAGTTAAATGGTATGGCAAGGGACCATTTGAGTGTTATCCTGATAGGAAAGCAGCTGCCCAAGTAGCAATTTATGAGATGGCTGTTCATGAGATGCATGTTCCCTACATTGCTCCTGGGGAAAGTGGTGGGAGGACGGATGTTAGATGGTTGACATTACAAAACAAAGATGGTATTGGTATATATGCTTCTATATATGGCGGTTCACCACCGATGCAAATGAGTGCAAGTTACTACTCAACAGCAGAGTTAGATCGGGCAACTCATAATGAGGATCTTGTTGCAGGAGACGACATTGAGGTTCATCTTGACCATAAGCATATGGGTATAGGAGGAGATGATAGCTGGTCACCATGTGTTCATAACAAGTACTTGATCCCTCCTGTTCCACACGAGTTTGCTATGAGATTATGTCCGGTCACTGCAGCAAATTCAGGCCATATTATCTACAAATCACAGCAGCAAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20174.p1 GENE.R_Transcript_20174~~R_Transcript_20174.p1 ORF type:5prime_partial len:1083 (+),score=200.96,Glyco_hydro_2_C|PF02836.13|2.6e-99,Bgal_small_N|PF02929.13|3.2e-69,Glyco_hydro_2_N|PF02837.14|1.8e-55,Glyco_hydro_2|PF00703.17|1.5e-14,DUF4981|PF16353.1|3.2e-14,DUF4981|PF16353.1|6.6e+03 R_Transcript_20174:2-3250(+)
RKREAHVPLHCHDKVEGSLKYWYERSRLDFSASNLAIWNNDAVCAALDCASSWVKDLPFVKSLSGYWKFHLASGPSSVPLNFHHNEFHDNTWGNLPVPSNWEMHGYGQPIYTNTQYPFPVDPPHVPTENPTGCYRTYFHIPNEWNGRRILIHFEGVDSAFHVWVNGVPVGYSQDSRLPAEFEITEYCHPCGSEKTNVLAVQVFRWSDGSYLEDQDHWWLSGIHRDVLLLAKPQVFIADYTFTSNLDGSFSQADLQVEVKIDTPQGMSRDCIFTDFTIEAKLYDNQKWHEHDGTSDLLKSLVAQMDLIPPASFRFHGYHFKGKIERPRLWSAEQPNLYTLVITLRDESGHVVDCESCQVGIRQITTTYKQLLVNGHPVVIRGVNRHEHHPRLGKTNLESCMIKDLVLMKQNNVNAVRNSHYPNHPRWYELCDLFGMYMIDEANIETHGFDHSGPFKHPTMEPSWAAAMLDRVVGMVERDKNHACIISWSLGNEAGYGSNHSALAGWIRGRDHSRVIHYEGGGSRTSSTDIICPMYMRVWDIVKIANDPNEARPLILCEYSHAMGNSNGNIDEYWEAIDNTFGLQGGFIWDWVDQGLLKEGAYGKKHWAYGGDFDDTPNDLNFCINGLTWPDRTPHPAVHEVKYVYQPIKISFKEGILKITNTHFYDTTQGLEFHWTLRGDGCELGSGVFSVPQVEPQSSFSMEWISGPWYSPWTSSIAEENFLTITAMLLHSTRWVEAGHIVSSAQVQLPPKREIAAHVINPKDAVLHTESSGDLIKIIQQDLSEIIFNTSTGYIESWKVQGTLVMNRGIAPCFWRAPTDNDKGGEAESYLSKWKASCLDNIVFITKSCCIQNKTDNLVEVAAVFLGVPSTEKSSGLQESNVIFTVKMTYLIYGAGDIIIQSSVEPRSDLPPLPRIGVEFCLHKTMDQVKWYGKGPFECYPDRKAAAQVAIYEMAVHEMHVPYIAPGESGGRTDVRWLTLQNKDGIGIYASIYGGSPPMQMSASYYSTAELDRATHNEDLVAGDDIEVHLDHKHMGIGGDDSWSPCVHNKYLIPPVPHEFAMRLCPVTAANSGHIIYKSQQQV*

Click here to download the sequence:
Link to NCBI Protein BLAST