Transcript Information: R_Transcript_20189.p1


Annotated TAIR IDAT1G71770.1
Annotated Gene Namepoly(A)-binding protein 5
Annotated Gene Symbol(s)PAB5
Annotation TypeHomolog
Chromosome Positionchr1:26990777-26993489 | Reverse length=682
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.920473752755
Replicate 22.7995067221731
Replicate 34.7340591032048
Condition 2: 8 Hour
Replicate 15.5501293880422
Replicate 28.1989900084347
Replicate 35.2034617111776
Condition 3: 24 Hour
Replicate 15.2037696382796
Replicate 24.558086837386
Replicate 33.5020327499036


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20189.p1 GENE.R_Transcript_20189~~R_Transcript_20189.p1 ORF type:5prime_partial len:150 (+),score=38.21,RRM_1|PF00076.18|2.1e-13,RRM_6|PF14259.2|5.6e-11,RRM_5|PF13893.2|3.4e-09,RRM_5|PF13893.2|3.9e+03 R_Transcript_20189:2-451(+)
GAGAGTTCTGACAGAAGGCTTTACATTGGTAACATTGATCATAGGATTTCCGAGGCCGCTCTGATAAAGATGTTCTCTCCATTTGGGAAAATTGAGTCTGAGGACTTCTTGTTGCATACCCGGGGACCCAAAAGGGGAGAACCACGTGGCTTTGCTTTTGTCCAGTACAGTATGAAAGAGGAAGCTTTATTGGCCAAGGAGAAGATGCATGGGAGGTTGGCCTGTGGCCGACCTTTGGTTGTACGTCTTGCAAGTGAGAAGTCTGTGGCTGAAGTGGCAGTTAATACACCGAAGGGCTGTGGTGTAGTGAGCCGATCAGCTGGTTCTGGCAGCAGTTCTGGACAAATGAGTCGAAGTGCCAAGATAGCTGCGATAAAGAACAAATTGAAGGCATTGGAAGACGATGGCGGTAGAGCAAAGAAGCAGAAACAGCTTGAGAGCATTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20189.p1 GENE.R_Transcript_20189~~R_Transcript_20189.p1 ORF type:5prime_partial len:150 (+),score=38.21,RRM_1|PF00076.18|2.1e-13,RRM_6|PF14259.2|5.6e-11,RRM_5|PF13893.2|3.4e-09,RRM_5|PF13893.2|3.9e+03 R_Transcript_20189:2-451(+)
ESSDRRLYIGNIDHRISEAALIKMFSPFGKIESEDFLLHTRGPKRGEPRGFAFVQYSMKEEALLAKEKMHGRLACGRPLVVRLASEKSVAEVAVNTPKGCGVVSRSAGSGSSSGQMSRSAKIAAIKNKLKALEDDGGRAKKQKQLESIS*

Click here to download the sequence:
Link to NCBI Protein BLAST