Transcript Information: R_Transcript_201914.p1


Annotated TAIR IDAT5G20220.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6822208-6825771 | Forward length=393
E-Value6E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.191533011072
Replicate 23.1448203266702
Replicate 33.7336973174345
Condition 2: 8 Hour
Replicate 13.0202829009818
Replicate 24.4327739332747
Replicate 33.1985216952224
Condition 3: 24 Hour
Replicate 14.348835730358
Replicate 21.8460348851144
Replicate 33.0854914096067


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_201914.p1 GENE.R_Transcript_201914~~R_Transcript_201914.p1 ORF type:complete len:227 (+),score=33.68,zf-CCHC_2|PF13696.2|9.2,zf-CCHC_2|PF13696.2|0.033,zf-CCHC_2|PF13696.2|0.00089,zf-CCHC_2|PF13696.2|0.0023,zf-CCHC_2|PF13696.2|0.00059,zf-CCHC_4|PF14392.2|0.036,zf-CCHC_4|PF14392.2|1.8,zf-CCHC_4|PF14392.2|0.059,zf-CCHC_4|PF14392.2|0.68,zf-CCHC_4|PF14392.2|0.6 R_Transcript_201914:785-1465(+)
ATGAAGATCATACATCGCGATCCTGCTCTCCATGCGCAAAGGGTGGCTGCAATTAAGAAAGCTAAACAGAAACCTGCTGCAAGGAAACACGCGTCTGAAACTTTGAAAACCTTCTTTAGTGATCCTGAAAACCGTCGCAAGAGAAGCATCTCAATGAAAGGGGTCAAATTCTTCTGCAATAACTGCGGACGTGAAGGGCATAGGAGCTTTTACTGTCCTGAGCTTGCAAAAGGTGTGGATAGACGATTCAAGTGTGGGTTATGTGGAGAACATGGCCACAATAGAAGTACTTGCCAAAAGCCAATAACAAGCACTCCAAAACAAAGAGTTCTACAGCAGTATCACTGTCGTGTATGTGGGCAAGTTGGGCATAACCGGAGGACTTGTCCTGTGAAGACAGAAGTACAGTCAAGTGGTGCTCCAACACAAGTTGGAAACACACTAAAAGATTCGAAGGGCCATGTCCGAAAGCCTTATCAATGCCGTGTTTGTGGAGAAGGTGGTCATAACAAGAGGACTTGTCCCATCCAATTATCAAAGGGACAGTCAGATTTTGAGACGAAAGAACTTCGAAGCTCTTTGAATCCCAGCAGCAGGATTAGAAAGCCTTATAGGTGTAGTATATGTCATGCAAATGGCCATAACCGGAGAACTTGTGCTGAAAGGATGGCATTAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_201914.p1 GENE.R_Transcript_201914~~R_Transcript_201914.p1 ORF type:complete len:227 (+),score=33.68,zf-CCHC_2|PF13696.2|9.2,zf-CCHC_2|PF13696.2|0.033,zf-CCHC_2|PF13696.2|0.00089,zf-CCHC_2|PF13696.2|0.0023,zf-CCHC_2|PF13696.2|0.00059,zf-CCHC_4|PF14392.2|0.036,zf-CCHC_4|PF14392.2|1.8,zf-CCHC_4|PF14392.2|0.059,zf-CCHC_4|PF14392.2|0.68,zf-CCHC_4|PF14392.2|0.6 R_Transcript_201914:785-1465(+)
MKIIHRDPALHAQRVAAIKKAKQKPAARKHASETLKTFFSDPENRRKRSISMKGVKFFCNNCGREGHRSFYCPELAKGVDRRFKCGLCGEHGHNRSTCQKPITSTPKQRVLQQYHCRVCGQVGHNRRTCPVKTEVQSSGAPTQVGNTLKDSKGHVRKPYQCRVCGEGGHNKRTCPIQLSKGQSDFETKELRSSLNPSSRIRKPYRCSICHANGHNRRTCAERMALK*

Click here to download the sequence:
Link to NCBI Protein BLAST