Transcript Information: R_Transcript_202006.p1


Annotated TAIR IDAT3G48510.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63350.1); Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17967568-17968452 | Reverse length=294
E-Value1.7E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5581795936955
Replicate 20.70414422127829
Replicate 31.6062651363156
Condition 2: 8 Hour
Replicate 15.5242500185858
Replicate 212.748429586286
Replicate 311.842819124277
Condition 3: 24 Hour
Replicate 111.688883558008
Replicate 26.3207144381533
Replicate 37.6073119948363


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_202006.p1 GENE.R_Transcript_202006~~R_Transcript_202006.p1 ORF type:5prime_partial len:328 (+),score=41.54 R_Transcript_202006:3-986(+)
GAGGGTGATGAATATTTTGTGCTAGAGATAGAAAGAGAAACCAAAACTCCTTCAATCTCTCATTTTCTTCCATTTTCCTTTATAAAGGAGGGTGGTAAAAGTAATATCATGGAGATGAGAGGATCTGGTGCGGGAGGGTGTTGCATAGAGAGCAGGTATGGCGGTAACCCTAATAATAGTAATTATTGTTCTGTAGATCCGTATGACTTATCTAAAATGGACCGGATCATGCTCCGTTTCCGGCCCATAGCTCCGAAGCCCGTTCCCGGGGGCGGCCCACCGGCCCAGCCGCAAAACGACGACGTTAAAGCCTCCGGGAAAGGTAAACGAAAAGGTGGTTCTTCCAACAATAATAAGAGAAGAAAGTCAAGTTCTCCTGTTAATAATCGTGGCAAGGGACACGTTGTCACACTTCCGCTGTTACCGGAAGCACCTGATCTGATGAGCCCGAAAGATCAGGGCCGTACATCATCATCATCATCATCAGCCACGTGGCTGAGTTTCGGGGGGTCAGATCAGGAAGAGCAAGATCCAGCGGTGGTGGTGGTATCGAGTGTGGTGGTGGAAGGTGTGACGGACACGTGGCTAGATGGGAAGGGGTTAGGTTGTACGGATGAGGAAAGGAGGATGAGGCTGATGGAGGACACGTGTCCTGGGTTTATATCCGACGGTTGGAATCGGGTTTGGTGGACAAACGATGCCTACCGTCGGATGGCGATAACTGGAGATGTTAGTCAGAAGAACACGTGTCAGAGTCAGGGTGGGAAGGAAAGCCACGTGGTGGTGGTTAAGCTGGGGTTGAGAGAAAAGGTGGAGTTACCAGGAGAGAAGTTATACCCTGCGTTCACGTGTAGGGTAAGGGTGCAGTACGGGAAAGAGGGGAGCCATCGGATGACGGTGCCTTGTGATGTATGGAAAATGGACGGTGGAGGTTATGCATGGCGGTTGGATGTTAAAGCTGCTCTTAGCCTTGCTTTGTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_202006.p1 GENE.R_Transcript_202006~~R_Transcript_202006.p1 ORF type:5prime_partial len:328 (+),score=41.54 R_Transcript_202006:3-986(+)
EGDEYFVLEIERETKTPSISHFLPFSFIKEGGKSNIMEMRGSGAGGCCIESRYGGNPNNSNYCSVDPYDLSKMDRIMLRFRPIAPKPVPGGGPPAQPQNDDVKASGKGKRKGGSSNNNKRRKSSSPVNNRGKGHVVTLPLLPEAPDLMSPKDQGRTSSSSSSATWLSFGGSDQEEQDPAVVVVSSVVVEGVTDTWLDGKGLGCTDEERRMRLMEDTCPGFISDGWNRVWWTNDAYRRMAITGDVSQKNTCQSQGGKESHVVVVKLGLREKVELPGEKLYPAFTCRVRVQYGKEGSHRMTVPCDVWKMDGGGYAWRLDVKAALSLALF*

Click here to download the sequence:
Link to NCBI Protein BLAST