Transcript Information: R_Transcript_202326.p1


Annotated TAIR IDAT5G52650.1
Annotated Gene NameRNA binding Plectin/S10 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21355781-21357003 | Reverse length=179
E-Value2E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4647437803169
Replicate 21.8144950977048
Replicate 31.5553957627017
Condition 2: 8 Hour
Replicate 11.2091785159133
Replicate 20.13803013482213
Replicate 30.22409395827638
Condition 3: 24 Hour
Replicate 11.4171485943027
Replicate 20.5445742935945
Replicate 30.81065572914435


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_202326.p1 GENE.R_Transcript_202326~~R_Transcript_202326.p1 ORF type:5prime_partial len:162 (+),score=18.81,S10_plectin|PF03501.11|5.2e-39 R_Transcript_202326:2-487(+)
TTTTTCTACCTTTGCGGTTCTTTAAACATAATGATTATCCCAAAGAAAGACCGAGTTTTAATCTCGAAAGCACTTTTTGAAGATGGTGTCATGGTTGGTCGAAAAGACTTTGATGCCCCCAAACACCACTCTCTCGATACCAAAAACTTATATGTTATTAAATTAATGCAATCTTTCAAATCTCGAGGATATGTCACTGAAACTTTCAACTGGCAATGGTATTATTGGGCTCTCACCAACGAAGGAATTGACTTCTTACGAGACTATTTACACTTAAAGAGTGAAGTCGTTCCTCTTACTTTAAAGAAGAAACCTCAAGTTGCCTCTCGAGGACCAAGAGGAAGAGGTGATAGAGAAAGAAGATTTGACCGTGGAGACAAAAAATCAACTCCTGGAGATTTTCAACCAAATTTTCGAGGTGAAGGTGAAAACTGGAGAAGAAATAGATCTGTCGGTCGAGGAGCTGCCCCACAAACATCTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_202326.p1 GENE.R_Transcript_202326~~R_Transcript_202326.p1 ORF type:5prime_partial len:162 (+),score=18.81,S10_plectin|PF03501.11|5.2e-39 R_Transcript_202326:2-487(+)
FFYLCGSLNIMIIPKKDRVLISKALFEDGVMVGRKDFDAPKHHSLDTKNLYVIKLMQSFKSRGYVTETFNWQWYYWALTNEGIDFLRDYLHLKSEVVPLTLKKKPQVASRGPRGRGDRERRFDRGDKKSTPGDFQPNFRGEGENWRRNRSVGRGAAPQTSE*

Click here to download the sequence:
Link to NCBI Protein BLAST