Transcript Information: R_Transcript_202379.p1


Annotated TAIR IDAT1G50270.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18622044-18623834 | Forward length=596
E-Value4E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1798321276327
Replicate 20.31029015393544
Replicate 30.33852321570669
Condition 2: 8 Hour
Replicate 10.24124004874133
Replicate 20.5507606364824
Replicate 30.1788336021713
Condition 3: 24 Hour
Replicate 10.11309264644189
Replicate 20
Replicate 30.32346361606252


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_202379.p1 GENE.R_Transcript_202379~~R_Transcript_202379.p1 ORF type:5prime_partial len:203 (+),score=33.52,PPR|PF01535.16|15,PPR|PF01535.16|0.00046,PPR|PF01535.16|0.0065,PPR|PF01535.16|0.018,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|4.4e+03,PPR_2|PF13041.2|3e+02,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|0.81,PPR_2|PF13041.2|0.81,PPR_1|PF12854.3|3.6e+02,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|2.1e+02,PPR_3|PF13812.2|84,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|3.8e+03 R_Transcript_202379:1-609(+)
GATATGTATGCCAAATGTGGAGACATTGAAGCAGCATGCTGTATCTTTGAGATGACGCCTAACAAAACTCTGGCCTCTTGGAATTCGATAATAGGCGGGTGTGCAAGACACGGGCTTGCCAGAAGGGCTTTAGATGAGTTTGAGAAAATGAATAGCAGCGATCTAAGGCCTGATCACGTAACCTTTGTCAATATCTTATCAGCATGTGCTCATCGAGGTCTGATTGACGAAGGTGAAAGGCTCTTCGGCTGCATGGAAACAGTTTACGAAATATCACCAGAAAAGGAGCACTATGCTTGCATGGTAGATCTATATGGGAGAGCAGGTCACATAGACAAGGCAGCACGCCTGATTGAATGTATGCCCTTTGAGCCAGACGTAGTTGTATGGGATGCATTGCTTGGGGCTTGTGGCCTGCATTTAGATCCTGAATTCAGCAATGATGCCGCAGATGCAATTCTGAACTTGGAAAAGGATCACCCTGCTGCATATTCGATGCTGTCAAAAATCCTTGGTGAAAAAGGTGTGTGGAGCTCTCTAGTTGAATTGAAAATCATGATGAAAGATAAACTCATTACAAAGCAGAAAGCTGGTAGTTGGATCAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_202379.p1 GENE.R_Transcript_202379~~R_Transcript_202379.p1 ORF type:5prime_partial len:203 (+),score=33.52,PPR|PF01535.16|15,PPR|PF01535.16|0.00046,PPR|PF01535.16|0.0065,PPR|PF01535.16|0.018,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|4.4e+03,PPR_2|PF13041.2|3e+02,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|0.81,PPR_2|PF13041.2|0.81,PPR_1|PF12854.3|3.6e+02,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|2.1e+02,PPR_3|PF13812.2|84,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|3.8e+03 R_Transcript_202379:1-609(+)
DMYAKCGDIEAACCIFEMTPNKTLASWNSIIGGCARHGLARRALDEFEKMNSSDLRPDHVTFVNILSACAHRGLIDEGERLFGCMETVYEISPEKEHYACMVDLYGRAGHIDKAARLIECMPFEPDVVVWDALLGACGLHLDPEFSNDAADAILNLEKDHPAAYSMLSKILGEKGVWSSLVELKIMMKDKLITKQKAGSWIS*

Click here to download the sequence:
Link to NCBI Protein BLAST