Transcript Information: R_Transcript_202718.p1


Annotated TAIR IDAT2G27610.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11783927-11786533 | Reverse length=868
E-Value2.1E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60843203182396
Replicate 20.19087545832998
Replicate 30.27765742540791
Condition 2: 8 Hour
Replicate 10.22259877224768
Replicate 20.40656148802156
Replicate 30.49504392601055
Condition 3: 24 Hour
Replicate 10.20870733843367
Replicate 20.33417058925117
Replicate 30.72959015622991


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_202718.p1 GENE.R_Transcript_202718~~R_Transcript_202718.p1 ORF type:complete len:330 (+),score=66.16,DYW_deaminase|PF14432.2|2e-46,PPR|PF01535.16|11,PPR|PF01535.16|4.3e-11,PPR|PF01535.16|0.055,PPR|PF01535.16|8e-05,PPR|PF01535.16|4.8e+03,PPR|PF01535.16|5.5e+03,PPR|PF01535.16|1.2e+04,PPR_2|PF13041.2|42,PPR_2|PF13041.2|3.3e-11,PPR_2|PF13041.2|5.5,PPR_2|PF13041.2|0.052,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.00044,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.0062,PPR_3|PF13812.2|3.7e+03,PPR_1|PF12854.3|39,PPR_1|PF12854.3|9.9e-07,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|4.6e+03 R_Transcript_202718:1002-1991(+)
ATGTACTCAAAGAGGGGTAATATTGATAGTGCACATAAAGTCTTTGAAAGACAAGGGGAAAGAGATTTAGTTTCTTGGAACTCTATGATCTCAGGATATGCGCAACATGGTTACGGCCATAAGGCTCTTGAAGTATTTGAGGAGATGCGAAGGAAAAAAATACAGACAGATGGTATTACATTCATTGGTGTGATTTGTGCCTGCACGCATGCTGGGCTTGTAGAAGAAGGTCAAAAATATTTTGATCTAATGGTCAAGGGGCAACATGTTAATCCCACCATGGAACACTATGCTTGTATGGTGGATCTTTATGGACGAGCTGGGATGTTGGATAAAGCCATGGACCTCATAAATGAGATGCCATTCCCAGCTGGTCCAACAGTGTGGCGAAGTCTCTTGGGTGCTTGCCATGTTCGCAGGAATGTAGAACTTGGTAAGCTTGCTGCAGAAGAACTCATTTCCCTTGAGCCACAAGATTCATCTGCCTATGTTTTATTATCAAACATCTACGCGGCTACTGGACACTGGAAGGAGAGGGCCAAAGTCAGGAAGTTAATGGATCAGAAGAAAGTGAGAAAGGAAGCTGGATACAGCTGGATTGAGGTCAAGAAGAAGACTTACTCGTTTTTGGCTGGTGATCATTCTCATCCATTGTCAGATCAAATATATTCAAAGCTTGATGATCTATCTAAGCGGCTGAAAGATGCAGGATACTGCCCTGACACCAATTATGTGCTCCATGATGTGGAAGATGAGCATAAAGAAGCTATTTTGTCTCAACATAGTGAAAGATTGGCCATTGCATTTGGACTAATTGCAACTTCCCCTGGTACTCCCCTCCAAATTGTGAAGAATCTTCGAGTATGTGGAGATTGTCATGTTGTTATTAAGCTTATCTCTAAGATTGAGGAACGGGATATTACTGTTCGGGATTCAAACCGATTTCATCACTTCAGGGGAGGCTTATGCTCATGTGGAGACTTTTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_202718.p1 GENE.R_Transcript_202718~~R_Transcript_202718.p1 ORF type:complete len:330 (+),score=66.16,DYW_deaminase|PF14432.2|2e-46,PPR|PF01535.16|11,PPR|PF01535.16|4.3e-11,PPR|PF01535.16|0.055,PPR|PF01535.16|8e-05,PPR|PF01535.16|4.8e+03,PPR|PF01535.16|5.5e+03,PPR|PF01535.16|1.2e+04,PPR_2|PF13041.2|42,PPR_2|PF13041.2|3.3e-11,PPR_2|PF13041.2|5.5,PPR_2|PF13041.2|0.052,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.00044,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.0062,PPR_3|PF13812.2|3.7e+03,PPR_1|PF12854.3|39,PPR_1|PF12854.3|9.9e-07,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|4.6e+03 R_Transcript_202718:1002-1991(+)
MYSKRGNIDSAHKVFERQGERDLVSWNSMISGYAQHGYGHKALEVFEEMRRKKIQTDGITFIGVICACTHAGLVEEGQKYFDLMVKGQHVNPTMEHYACMVDLYGRAGMLDKAMDLINEMPFPAGPTVWRSLLGACHVRRNVELGKLAAEELISLEPQDSSAYVLLSNIYAATGHWKERAKVRKLMDQKKVRKEAGYSWIEVKKKTYSFLAGDHSHPLSDQIYSKLDDLSKRLKDAGYCPDTNYVLHDVEDEHKEAILSQHSERLAIAFGLIATSPGTPLQIVKNLRVCGDCHVVIKLISKIEERDITVRDSNRFHHFRGGLCSCGDFW*

Click here to download the sequence:
Link to NCBI Protein BLAST