Transcript Information: R_Transcript_202718.p2


Annotated TAIR IDAT2G27610.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11783927-11786533 | Reverse length=868
E-Value1E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19146462539915
Replicate 20.14682727563845
Replicate 30.080093488098435
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.31733585000677
Condition 3: 24 Hour
Replicate 10
Replicate 20.38558144913597
Replicate 30.30612174387269


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_202718.p2 GENE.R_Transcript_202718~~R_Transcript_202718.p2 ORF type:5prime_partial len:286 (+),score=49.50,PPR|PF01535.16|0.00058,PPR|PF01535.16|0.0069,PPR|PF01535.16|0.15,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|4e+03,PPR|PF01535.16|0.37,PPR|PF01535.16|6.9e-05,PPR_2|PF13041.2|0.026,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|27,PPR_2|PF13041.2|1.6e-12,PPR_2|PF13041.2|8.9,PPR_2|PF13041.2|0.00088,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|24,PPR_3|PF13812.2|5.2e+03,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|2,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.63,PPR_1|PF12854.3|0.0089,PPR_1|PF12854.3|21,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|0.89 R_Transcript_202718:3-860(+)
TATGGTATGACTGTGGAAGGCACTGAAGTTCATGCACATGTTATCAAAAGTGGTCTTGAAACAAGCACTCCCGTGGGTAATTCATTAGTTAATATGTATGCAAAGTCTGGGATGGTAAAAGAGGCTAGAGCTATGTTTACTGCCATGGAAAACAAGAATGCTGTTTCTTGGAGCAGTATGATCGCAGGTCTTGTGACAAATGGGTTTGATCAGGAAGCTCTTCACCTGTTCCAAAGGTCGACGAGCCTTGAAGATGTACCGCTTACACAGCCAATGTTTGCTACAATCACTAAAGCTTGTGCTAATATAAAGGACTTATCTTTTACAAGACAGCTCCACTCCCAAGTTACTAAGAGTGGATTTGACTTTGATCTTAATATAAGGACAGGTCTTATGGTTGCTTATAGTAAGTGTGGTGACATGGGTGGTTCATTTAAGATGTTCTCAACGATGAGACAAAGCCAAAGTGTGATCTCCTGGACAGCCATGATTACTGGATACTTGCAGAATGGTGGAAAGGAGAAAGCAGTTCAGATATTTCTTGAGATGAACAGGATGGGTATTAGACCAAATGATTTTACTTACTCGGCTATTCTTACTGCTCATTCGTGTGTTTCACCATTTCAGATACATGCACATGTGATGAAAACAAATTATCTGAACTCACCAAATGTCGGAACTGCTCTTTTGGATGCCTATCTCAAGACTGGAAATGCAATTGAAGCTGGCAAAGTATTTGAAGTTATTTCTAACAAGGACATTGTAGCATGGTCTGCTATGTTGGTTGGATATGCTCAAGTCGGAGACACAGAGAGAGCTATAAACATATTTCGTCAGCTGGTAAAGGAGGGATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_202718.p2 GENE.R_Transcript_202718~~R_Transcript_202718.p2 ORF type:5prime_partial len:286 (+),score=49.50,PPR|PF01535.16|0.00058,PPR|PF01535.16|0.0069,PPR|PF01535.16|0.15,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|4e+03,PPR|PF01535.16|0.37,PPR|PF01535.16|6.9e-05,PPR_2|PF13041.2|0.026,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|27,PPR_2|PF13041.2|1.6e-12,PPR_2|PF13041.2|8.9,PPR_2|PF13041.2|0.00088,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|24,PPR_3|PF13812.2|5.2e+03,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|2,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.63,PPR_1|PF12854.3|0.0089,PPR_1|PF12854.3|21,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|0.89 R_Transcript_202718:3-860(+)
YGMTVEGTEVHAHVIKSGLETSTPVGNSLVNMYAKSGMVKEARAMFTAMENKNAVSWSSMIAGLVTNGFDQEALHLFQRSTSLEDVPLTQPMFATITKACANIKDLSFTRQLHSQVTKSGFDFDLNIRTGLMVAYSKCGDMGGSFKMFSTMRQSQSVISWTAMITGYLQNGGKEKAVQIFLEMNRMGIRPNDFTYSAILTAHSCVSPFQIHAHVMKTNYLNSPNVGTALLDAYLKTGNAIEAGKVFEVISNKDIVAWSAMLVGYAQVGDTERAINIFRQLVKEGF*

Click here to download the sequence:
Link to NCBI Protein BLAST