Transcript Information: R_Transcript_202941.p1


Annotated TAIR IDAT1G15360.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)SHN1, WIN1
Annotation TypeOrtholog
Chromosome Positionchr1:5283609-5284506 | Forward length=199
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5872139960625
Replicate 21.2552136118439
Replicate 31.3694245302048
Condition 2: 8 Hour
Replicate 10
Replicate 20.12152653174557
Replicate 30.098650057719494
Condition 3: 24 Hour
Replicate 10.62385345727457
Replicate 20.11986553744879
Replicate 30.23790983355323


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_202941.p1 GENE.R_Transcript_202941~~R_Transcript_202941.p1 ORF type:5prime_partial len:184 (+),score=35.04,AP2|PF00847.16|4.7e-14 R_Transcript_202941:1-552(+)
TGCAAACTTTTCTCCATCCACAAATTGATTGGAGTACTTACTGCCTTTGGGGCCATGGAACTCCTATTCCAGCAGCCACAGGACAAACAGAGCAATTTGTCGCAGACAAGTCAAAGCGAAAAGATTAAGGGAAGCAGGAGCAAATTTGTAGGTGTGAGGCAGAGACCTTCAGGGAAATGGGTGGCAGAAATCAAAAACACCACTCAGAAGATTAGGATATGGTTGGGCACCTTCGATACTGCTGAAGAAGCTGCTCGGGCTTACGATGAAGCTGCTTGCCTTCTTCGTGGTTCCAACACTCGAACCAACTTTGTCCATCCTCCTGCCTCAAACTCTGCTCTCTCTCGAAGAATTAGAAACCTTGTCAACCAGAAAAGGGGCTTACGCTTGATCAACAGCCAAGGCCAATCAGCTCCCACTCCTCCAAACACCACAATAAGCCTCAATAAAGCAGCAGCAGCAGTTGCAGCTGATATTAATCATGTTAATATGGCTTTGTTGGGAGCCAAGCCAATAACGTCATCAACGAAATCACATATAAGCCAGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_202941.p1 GENE.R_Transcript_202941~~R_Transcript_202941.p1 ORF type:5prime_partial len:184 (+),score=35.04,AP2|PF00847.16|4.7e-14 R_Transcript_202941:1-552(+)
CKLFSIHKLIGVLTAFGAMELLFQQPQDKQSNLSQTSQSEKIKGSRSKFVGVRQRPSGKWVAEIKNTTQKIRIWLGTFDTAEEAARAYDEAACLLRGSNTRTNFVHPPASNSALSRRIRNLVNQKRGLRLINSQGQSAPTPPNTTISLNKAAAAVAADINHVNMALLGAKPITSSTKSHISQK*

Click here to download the sequence:
Link to NCBI Protein BLAST