Transcript Information: R_Transcript_203.p1


Annotated TAIR IDAT3G09180.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2819278-2821096 | Forward length=402
E-Value4E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5632402386797
Replicate 22.7995067221731
Replicate 34.5813475192305
Condition 2: 8 Hour
Replicate 13.0315832791827
Replicate 24.4189361733772
Replicate 36.2234093555612
Condition 3: 24 Hour
Replicate 14.7555457828816
Replicate 23.1507512700825
Replicate 33.7521779463253


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_203.p1 GENE.R_Transcript_203~~R_Transcript_203.p1 ORF type:complete len:420 (+),score=76.77,Med27|PF11571.4|2.9e-27 R_Transcript_203:102-1361(+)
ATGCTGCAACACTCTCAAAACCACCACCATCTTCATCAACAACAACAACCACAAACTCTACAAACACCGCCGCAAACGACGTCGTCGACACCGTCTCCGCCAGAAACAACCGGAGAAGCGCCGCTGAAACAGGTCGCTATGGCGATGGATCGCCTCGGCGAAGCCGCTCGTCTTATCGCCGACATTCGGCTGGGCGCTGATCGCCTTCTTGAAGCCTTGTTTATTTCCTCCGAAACTCATCAGTCTTCCAAAACTCTCAATTTGATTCTTAAAGAAGAGTCTTCTATGCGACAATACCTCCAGGATCTTCGTGATATCGGAAGGCAACTTGAGAATTCTGGGGTTCTCAGTGAAGCGCTACGATCTCGAAGCAATTCTTGGGGATTGCACATGCCTTTGGTTTGTCCAGATGGTGCAGTTGTTGCATATGCATGGAAGAGGCAACTTGCTGGCCAGGCTGGTGCTTCTGCTGTTGACAGGACTAGACTAGCTCTGAAGTCCTTCATGGATCAGAGACGTAGGTTTTTTCCTCACCTTGACTCTGAATCAGCTTCAAAGAAACAACATGTTTCTGAAGAATCTTTGGAGAACCCAGAAGAACCTAGTGAGTACAAAACACTTGCAGATATAATAGAATGTCTTGAGAAAGAAGTGCCCAGCTTGAAGATTTGCACTTATGTAAGGTTGGAGTGGTTGGATAAAGCTGCTTCACTTCCTACTTCAGAAAGTGAGAGTTCTTTTGATACACCAATGGAACATGATCGTGATGCAAGAATTGGATCCTTTGGCGGTGTTCCTTCAGATAAAGTTGCTGTGATTGAGTTGTTGATACCTTCTGTCTTTAGAGCTATTGTTTCAGTACACCCTGTTGGTTCCACAGATCCTGATGCAGTAGCCTTCTTTTCACCTGATGAGGGAGGAAGTCATGTTCATGCTAGAGGCTTATCAGTTTATCATGTATTTAGGCATATTACGGAACTATCAAATATAGCTTTGCAACATTTTCTTGGAAATAAACCCGAGATGGCCCTGTACTATCTTCTGCAATGGATCAGCAGCTACCAAAGTCTATTTACCCAAGCGTGCAGCAAATGTGGACGGCTATTATCATTGGATAAACAATCAGCACTTTTATTGCCTCCAGTGCATCGTCCCTATCGGGACCTCTCTGCGGATAACACTGCATCAACCTCACTAAAGGATCAGAGTTCAAACACAGTGCAAGCGTATCATGTCAGCTGCTCTCCACCAGATATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_203.p1 GENE.R_Transcript_203~~R_Transcript_203.p1 ORF type:complete len:420 (+),score=76.77,Med27|PF11571.4|2.9e-27 R_Transcript_203:102-1361(+)
MLQHSQNHHHLHQQQQPQTLQTPPQTTSSTPSPPETTGEAPLKQVAMAMDRLGEAARLIADIRLGADRLLEALFISSETHQSSKTLNLILKEESSMRQYLQDLRDIGRQLENSGVLSEALRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFMDQRRRFFPHLDSESASKKQHVSEESLENPEEPSEYKTLADIIECLEKEVPSLKICTYVRLEWLDKAASLPTSESESSFDTPMEHDRDARIGSFGGVPSDKVAVIELLIPSVFRAIVSVHPVGSTDPDAVAFFSPDEGGSHVHARGLSVYHVFRHITELSNIALQHFLGNKPEMALYYLLQWISSYQSLFTQACSKCGRLLSLDKQSALLLPPVHRPYRDLSADNTASTSLKDQSSNTVQAYHVSCSPPDI*

Click here to download the sequence:
Link to NCBI Protein BLAST