Transcript Information: R_Transcript_20341.p1


Annotated TAIR IDAT3G24730.1
Annotated Gene NamemRNA splicing factor, thioredoxin-like U5 snRNP
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9030152-9030894 | Reverse length=159
E-Value3.8E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.85765077386
Replicate 220.996300416298
Replicate 322.303928712043
Condition 2: 8 Hour
Replicate 122.391679129389
Replicate 229.569324013673
Replicate 336.18380274985
Condition 3: 24 Hour
Replicate 126.582724158394
Replicate 224.086664314709
Replicate 322.751693029801


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20341.p1 GENE.R_Transcript_20341~~R_Transcript_20341.p1 ORF type:complete len:152 (+),score=27.39,DIM1|PF02966.12|2.5e-49 R_Transcript_20341:196-651(+)
ATGAGCTGTGTGCTTAAAACCCTAACCATGAAGAAGGAAGTCGACACTCTCATCAGAGACACCATCGACAAAGTCCTAGTCCTCCGTTTCGGCCGTTCTTCCGACCCCGTTTGCCTTCACCTCGACGACATCTTGGCAAAGTCAGCTCATGATGTGTCAAAGTTTGGGAGTGTAGCATTGGTGGATATAGACTCAGAGGATGTTCAAGTCTATGTCAAGTACTTTGACATCACACTCATACCTTCAACCATCTTTTTCTTCAATGCTCATCACATGAAGATGGATTCTGGGACTGCAGATCACACTAAATGGATTGGAGCATTTTACAAAAAGCAGGATTTCATTGATGTTGTTGAGGCAATATTTAGAGGAGCCATGAAAGGCAAGCTGATTGTGACATGTCCTCTGCCTCCTGAGCGAATACCAAAATTCCAGTTATTATACAGGGATGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20341.p1 GENE.R_Transcript_20341~~R_Transcript_20341.p1 ORF type:complete len:152 (+),score=27.39,DIM1|PF02966.12|2.5e-49 R_Transcript_20341:196-651(+)
MSCVLKTLTMKKEVDTLIRDTIDKVLVLRFGRSSDPVCLHLDDILAKSAHDVSKFGSVALVDIDSEDVQVYVKYFDITLIPSTIFFFNAHHMKMDSGTADHTKWIGAFYKKQDFIDVVEAIFRGAMKGKLIVTCPLPPERIPKFQLLYRDV*

Click here to download the sequence:
Link to NCBI Protein BLAST