Transcript Information: R_Transcript_203506.p1


Annotated TAIR IDAT3G26750.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:9840139-9841719 | Reverse length=526
E-Value7E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62941244671444
Replicate 20.18100258979567
Replicate 31.7772468824601
Condition 2: 8 Hour
Replicate 10.633255127946
Replicate 20.57829866830652
Replicate 30.93887641139933
Condition 3: 24 Hour
Replicate 10.59373639381993
Replicate 20.7605261686406
Replicate 31.3208097655886


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_203506.p1 GENE.R_Transcript_203506~~R_Transcript_203506.p1 ORF type:5prime_partial len:116 (+),score=17.46 R_Transcript_203506:1-348(+)
AGCGCTAAAGATGAATTATCCTTCCGGACTGTTGTTAAGGATCTGAAGACGAAGTCTCCAATATTGCATATAGTTCTCCTTAATCCAAATTCATGGTGTTGTTCTGGTGATTGCTTGGAGGGTGCTCCTGAACAGCTTGTAAAGATCAACTTGCATCCTGTTGTTAAGGTGCTTTTTTCTCATTGCTGCAATGGCAAGGAATATGAGCTAAGGTTAGTTATAGCTTTCTTGTTAGCTTTTTGGCCTTTGCAACTTGCAAGCATCTGTGATATGCATTTTCATGTTGGATTTGCACTTATTGGAGTACTTTGTCTTTGTGGTTACGTATCTTTGTTGTGCACCCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_203506.p1 GENE.R_Transcript_203506~~R_Transcript_203506.p1 ORF type:5prime_partial len:116 (+),score=17.46 R_Transcript_203506:1-348(+)
SAKDELSFRTVVKDLKTKSPILHIVLLNPNSWCCSGDCLEGAPEQLVKINLHPVVKVLFSHCCNGKEYELRLVIAFLLAFWPLQLASICDMHFHVGFALIGVLCLCGYVSLLCTL*

Click here to download the sequence:
Link to NCBI Protein BLAST