Transcript Information: R_Transcript_203987.p1


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value1.4E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0060687140396
Replicate 21.3226016010266
Replicate 30.54110403770439
Condition 2: 8 Hour
Replicate 10.57840625859634
Replicate 20.5282098072721
Replicate 30.14292606787706
Condition 3: 24 Hour
Replicate 10.90385067825607
Replicate 20.52099036749395
Replicate 30.34468826278579


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_203987.p1 GENE.R_Transcript_203987~~R_Transcript_203987.p1 ORF type:complete len:127 (-),score=21.19,Transket_pyr|PF02779.20|1.3e-18 R_Transcript_203987:497-877(-)
ATGTGGATCTCCAGACTAATGCTTGTAATGGATATGCAGGTGGTGCATGATGTAGATCTCCAAAGACTGCCCGTCAGATTTGCCATGGATAGAGCCGGTTTAGTGGGTGCAGATGGACCAACCCACTGTGGTGCGTTTGATATCACCTACATGGCTTGTTTGCCAAATATGATTGTTATGGCTCCATCAGATGAAGCAGAGCTGATGCACATGGTTGCAACAGCGACAGCTATAGATGACAGGCCAAGCTGCTTCAGATACCCAAGGGGGAAGGGGATAGGAGTATCCCTTCCACCTGACAATAAAGGAACACCACTTGAGGTCAGCACAGAACAATCTCTTCAAATATCTGTAACAAGAAATAAAGAATTATGTATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_203987.p1 GENE.R_Transcript_203987~~R_Transcript_203987.p1 ORF type:complete len:127 (-),score=21.19,Transket_pyr|PF02779.20|1.3e-18 R_Transcript_203987:497-877(-)
MWISRLMLVMDMQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMIVMAPSDEAELMHMVATATAIDDRPSCFRYPRGKGIGVSLPPDNKGTPLEVSTEQSLQISVTRNKELCI*

Click here to download the sequence:
Link to NCBI Protein BLAST