Transcript Information: R_Transcript_203987.p3


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value4.1E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.43337814065921
Replicate 20
Replicate 30.16063372230431
Condition 3: 24 Hour
Replicate 10.2031664356434
Replicate 20
Replicate 30.19369650165396


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_203987.p3 GENE.R_Transcript_203987~~R_Transcript_203987.p3 ORF type:complete len:113 (-),score=20.17,DXP_synthase_N|PF13292.2|7e-26,E1_dh|PF00676.16|7.4e-07 R_Transcript_203987:1532-1870(-)
ATGTCATGGAAAAACAACTTAACATTTGCAGGCATGGCAGTTGCGAGAGACCTTTTAGGAAAAAAGAACAATGTTATTTCAGTGATTGGGGATGGAGCGATGACTGCAGGACAGGCATATGAGGCTTTAAATAATGCAGGGTACCTTGACACTAACCTCATTGTCATACTGAATGACAATAAGCAAGTTTCTTTGCCCACCGCAACTCTTGATGGGCCTGCAACTCCTGTTGGAGCACTCAGCAGCGCTCTTTCAAAGCTCCAAGCAAGTCCCAAATTCCGAAAACTTCAGGAAGCGGCCAAGGTAGATATCACCCCCAGTCAACTCCATAGTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_203987.p3 GENE.R_Transcript_203987~~R_Transcript_203987.p3 ORF type:complete len:113 (-),score=20.17,DXP_synthase_N|PF13292.2|7e-26,E1_dh|PF00676.16|7.4e-07 R_Transcript_203987:1532-1870(-)
MSWKNNLTFAGMAVARDLLGKKNNVISVIGDGAMTAGQAYEALNNAGYLDTNLIVILNDNKQVSLPTATLDGPATPVGALSSALSKLQASPKFRKLQEAAKVDITPSQLHSV*

Click here to download the sequence:
Link to NCBI Protein BLAST