Transcript Information: R_Transcript_204051.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value1E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1434569507596
Replicate 20.48715314190947
Replicate 30.85036612885949
Condition 2: 8 Hour
Replicate 10.34087050970643
Replicate 20.57069536021587
Replicate 30.80018701110755
Condition 3: 24 Hour
Replicate 11.8110567186588
Replicate 20.76758441614538
Replicate 30.8125366009057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_204051.p1 GENE.R_Transcript_204051~~R_Transcript_204051.p1 ORF type:complete len:431 (+),score=53.24,RVT_3|PF13456.2|3.8e+03,RVT_3|PF13456.2|2.6e-22,zf-RVT|PF13966.2|9.7e-21,zf-RVT|PF13966.2|5.3e+03,RNase_H|PF00075.20|2.4e-06 R_Transcript_204051:406-1698(+)
ATGTTCTGGCACCATAATTGGGCTATTGATGCCCCACTGTCTAGTGTGGCTACGCGTCCTATCCCACCAGACATGGAGGATGCCACAGTAGCGGAGATGTGGGATATTAACCAAGGGTGGCGGTGGGACTGGTTTGCAGACTGGCTCCCTGTAGATGTGTTGGAGAAGATTGAGGCCTTTGAAATTAACCAAGATGCGGAAGAGGCGGACATGCTCTATTGGAATGGTAGCCCTACGGGGGGCTTCACAATCAAATCTGCACTTCATATCATCCGCAAGGAGGTGGATTTACCCTCTAGTAGGGGGTGGAAGCTACTATGGAAATCACCACTCCCCCAGCGAATAAAATTCTTTTTGTGGTTGGCTACCCATGATAGGGTCATGTCCAACGCCAATCGTTGCATACGTGGCTTGGCCGAGGATGCTAGATGTCACATTTGCGGTGCGCCAGAAGAAACCACCAACCATATTCTTCGTGAGTGCCCTGTTGCCACCTCGATTTGGCGAAAATTTGGTCTCGCTGGACAGGCACTTCATGGACGTCCCTTGAAGGGCTGGATTGAAGAGAACTTAAACTCTCACGAGGAGTTGTGGCCTACGACTTTTGGTGTTATTATTTGGTGGGTCTGGAGATGGAGAAATGAAAGGCTCTTTAGGGACCAAGTAAGAATTCCCTTGAATCAGTCTGGGTTTATCAAAGAGCGTGTCTTCGAGGTACAGAAGGCACTTGGCCGAGATGACCATCTCTTGCTTGATGGGCGTGTTCCAAGGAAGGAGGTACTGGTTTGCTGGGAGTCCCCACGACAAGGGTGGGTGAAACTTAATACCGATGGTGCCTCGAAGGGTAACCCGGGACGTGCTGGTGGTGGGGGCGTACTCCGTGATGCTACTGGACGTTTCATCTTTGGCTTTTCTGCTGCTTTGGGCGTATGCTCGAGTACGAAGGCCGAGCTTCTAGCGATACTTAAGGGATTGTCCCGTGCCTGGGCGAAGGGCTATAAAGCAGTGGTACTCGAAACTGACTCTAAGGTGACAGTAAGGCTCCTCACTGGGGCTGCTCCTCAGGCTTCGTCGTTGTACCATCTTTTGAACCAGTGCAGGTTGTTGACAAGGAAGGAAGGCTGGCAGGTTGAGGTCACTCATTGCTATCGCGAGGCGAACCAAGTGGCAGATGCGCTTGCCAACATGGGAGTTACCCAAGCTGCCAGGTTGGTGAATTTTGAAACCCCCCTGATGTTGTTCGGCCCTTGCTGCGGAATGATGTTGCTGGTGTTGCTTGGCCAAGAATGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_204051.p1 GENE.R_Transcript_204051~~R_Transcript_204051.p1 ORF type:complete len:431 (+),score=53.24,RVT_3|PF13456.2|3.8e+03,RVT_3|PF13456.2|2.6e-22,zf-RVT|PF13966.2|9.7e-21,zf-RVT|PF13966.2|5.3e+03,RNase_H|PF00075.20|2.4e-06 R_Transcript_204051:406-1698(+)
MFWHHNWAIDAPLSSVATRPIPPDMEDATVAEMWDINQGWRWDWFADWLPVDVLEKIEAFEINQDAEEADMLYWNGSPTGGFTIKSALHIIRKEVDLPSSRGWKLLWKSPLPQRIKFFLWLATHDRVMSNANRCIRGLAEDARCHICGAPEETTNHILRECPVATSIWRKFGLAGQALHGRPLKGWIEENLNSHEELWPTTFGVIIWWVWRWRNERLFRDQVRIPLNQSGFIKERVFEVQKALGRDDHLLLDGRVPRKEVLVCWESPRQGWVKLNTDGASKGNPGRAGGGGVLRDATGRFIFGFSAALGVCSSTKAELLAILKGLSRAWAKGYKAVVLETDSKVTVRLLTGAAPQASSLYHLLNQCRLLTRKEGWQVEVTHCYREANQVADALANMGVTQAARLVNFETPLMLFGPCCGMMLLVLLGQEW*

Click here to download the sequence:
Link to NCBI Protein BLAST