Transcript Information: R_Transcript_20463.p1


Annotated TAIR IDAT5G55960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22662726-22664762 | Forward length=648
E-Value1.5E-305
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.07815962617
Replicate 218.967516787116
Replicate 326.314641809077
Condition 2: 8 Hour
Replicate 125.725180197643
Replicate 229.871668839989
Replicate 339.337769642035
Condition 3: 24 Hour
Replicate 130.528249795122
Replicate 221.412544291005
Replicate 330.716640779925


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20463.p1 GENE.R_Transcript_20463~~R_Transcript_20463.p1 ORF type:complete len:652 (+),score=126.62,UPF0118|PF01594.12|1.1e+04,UPF0118|PF01594.12|41,UPF0118|PF01594.12|5.2e-07 R_Transcript_20463:329-2284(+)
ATGGAGCTAGTCCCATACTCAGACCCAAAAGAAACCTCAAACTCTACAACACCACCGTGGCAAGACATGTTCAGATCAGCTTCAGTTCGCAAACCCACTTCCCCACCACGTGACTCTCACGTGCCACCATCATCATCAACTGCCACCTCTACCCCCACCCCAACTACCACCACTGCCACCTTCTCAGGTGACCCTCACGTGCGTTTAGCCCTTTACATTGCAATGGCACATGCTGGTCTCCTTTTCTCTCTTCTTACTCTTTATGGTGTTTTTCTACTTTTACAAGGTTATCTACGCCCACTTCAATGGGCTGTAATTTGTTCCATCCCTTTGAGAGGTATTCAACAAACCCTTGTTGGGTTTTGGTCTGAGCCCCTTAAACTTGGCCTCACTGAAACCATTTTAGCTGTCCCAATTGCCATTTTTAGGGTCTTTATTGGTACCATTGTTGAGTTGAAATATGTTGTGTTTAAGTTCCTAGGACTTCAGAAAGGGAAAAGATCCAACTTATTGAGGAAAAAGAGAAGTGGGTTTTCAAAATGGTTGCGTTGGCTTCTTTCTTTTAGTATATTTGTGCTTGTTTATGAGCGTTTGGGATTGTTTGGGGCATTTGGGATTTTGGGGTTTGGGTTTGTGTTTAGTGCTAGTAGTGTGGAATCAACTATGGATGCTGTGTCTACTTTTAGGAACCAAAGTTTTAGGAGAATGAAAGTTACTTCTTTCTTGACTAGAGGTGTTTTGAAGAGGTTAGAGACTATTGTTGCTATTGGATTGATTGTTGTTATGATTGTTGGGTTCTTGGCTTGCTCTATTTTCTTCTCTTATAAGATTGGTGTCGAGGGACGGGATGTGGTTTTTAAGTTGAAGTCTCATGTGGAGGAGAGTAATTATGCTGAGAAGATTGGGTTTAAGAAGTGGATGGATGAGAATGATGTGCCTGGGATGGTGGATAGGTACACTACTAAGTTTTATGAGACGGTTTCGGACCAGATTGATGGATTAGCAATGCAGTATAATATGACCGAATTTGTCACTGGGATTAAACAGTTTGTGATTAAGCCTGTCAACTCTTCTGAGCCTTCAACTGAGTTGATGGCCCCTTCTTTTTATACTGAGAAGATGATGAGTTTGAGAGAAAAGTTTAAGGATAGAGCTTGGATGGATATCTTCACTGATCTTGATGACATTGTTAGAGACCTTATTGCTAGTAGGGTTGATTTGGTTGAGAAGGTAAAAGGGTTTGCCATTCAAGGACTTGATGTGGCACAACGCTTGTTTTCGAGTAGCATTCCTGTTCTTGGTGGTGGGGCTAAGTTTATGTTCACCATTCTTGGGTCCATTGTTTCTGGTGCAGCCGGTTTTATCAACTTTATATCGCAGTCAATGGTGTTCTTTTGGGTTTTGTATTACCTTATAACCTCGGAGTCTGGTGGAGCCACCGAGCAGGTTATGCATTTGCTCCCTGCATCAAATGCAACTAGAACTCGTTGTGTTGAGGTTATCGATAAGGCAGTGTCCGGAGTCATGCTGTCTACAGTCGAGATTGCATTGGTTCAGGGTTGTTTGACTTGGCTTCTGTTTAGGCTGTTCTCTATTCACTTCCTGTACATGTCAACCTTACTAGCATTCATCTGCCCTTTGTTGCCCCTTTTCCCTACATTTGTGGCAACCATCCCGGCAGCCTTGCAGCTTGTTTTGGAGGGTAAATACATATTGGCTATTTGCTTGTTTGTTATTCATCTTGTGCTCTTGGAGTATGGTGCATCTGAGATCGTCGAGGATATACCTGGTTACAATGGATACCTTACTGGGCTTAGCATTATTGGTGGGATGACATTGTTCCCATCCGCATTGGAGGGAGCTATAATGGGACCTCTGATAACCACTGTTGTGATCGCCCTTAAGGACTTGTATGCTGAATTTGTGTTGAATGAACCGAAGGAAAAGAGCGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20463.p1 GENE.R_Transcript_20463~~R_Transcript_20463.p1 ORF type:complete len:652 (+),score=126.62,UPF0118|PF01594.12|1.1e+04,UPF0118|PF01594.12|41,UPF0118|PF01594.12|5.2e-07 R_Transcript_20463:329-2284(+)
MELVPYSDPKETSNSTTPPWQDMFRSASVRKPTSPPRDSHVPPSSSTATSTPTPTTTTATFSGDPHVRLALYIAMAHAGLLFSLLTLYGVFLLLQGYLRPLQWAVICSIPLRGIQQTLVGFWSEPLKLGLTETILAVPIAIFRVFIGTIVELKYVVFKFLGLQKGKRSNLLRKKRSGFSKWLRWLLSFSIFVLVYERLGLFGAFGILGFGFVFSASSVESTMDAVSTFRNQSFRRMKVTSFLTRGVLKRLETIVAIGLIVVMIVGFLACSIFFSYKIGVEGRDVVFKLKSHVEESNYAEKIGFKKWMDENDVPGMVDRYTTKFYETVSDQIDGLAMQYNMTEFVTGIKQFVIKPVNSSEPSTELMAPSFYTEKMMSLREKFKDRAWMDIFTDLDDIVRDLIASRVDLVEKVKGFAIQGLDVAQRLFSSSIPVLGGGAKFMFTILGSIVSGAAGFINFISQSMVFFWVLYYLITSESGGATEQVMHLLPASNATRTRCVEVIDKAVSGVMLSTVEIALVQGCLTWLLFRLFSIHFLYMSTLLAFICPLLPLFPTFVATIPAALQLVLEGKYILAICLFVIHLVLLEYGASEIVEDIPGYNGYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIALKDLYAEFVLNEPKEKSE*

Click here to download the sequence:
Link to NCBI Protein BLAST