Transcript Information: R_Transcript_204888.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4196747409226
Replicate 20.81652279396715
Replicate 31.0180772264957
Condition 2: 8 Hour
Replicate 10.544130332161
Replicate 20.99381697071936
Replicate 31.0084228122437
Condition 3: 24 Hour
Replicate 11.5305204818469
Replicate 20.49011686423505
Replicate 30.60799179685826


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_204888.p1 GENE.R_Transcript_204888~~R_Transcript_204888.p1 ORF type:internal len:180 (+),score=10.49,zf-RVT|PF13966.2|5.6e-20,zf-RVT|PF13966.2|1.6e+04 R_Transcript_204888:2-538(+)
AGAGATTGTGAGGTAGAAGAACTGTCTTCGCTTTTGGCTGTTTTGGAGGGAGTGACACTGTCCAATGAGGAGGATCGCCGTAGTTGGATGGGGGATCCCTCGGGGTTGTTCTCGTGTGGTTCCTTTCTTCGCTGCTTGCAAAGTTCGACAGGTGGGAACTCCTTCCCTCTAGCTAGATTTATTTGGAAGGCTAAGGCCCCCTTTAAGGTCAGGGCGTTTATTTGGACCTTAGTCTTAGGGAGGATTAACACCAATGATATGCGACAGCGACGGAGGCCTTATTCGTGTCTTTCTCCGGATATATGCGTTATGTGCGGGGAGAGTGGGGAGACGGCCACTCATCTGTTCCTCCATTGTCCAGTTGCTCGAGTCTTGTGGGCTTCGTTGTTTGGAGTGCGTGGGGAAGCCCTAGTATGTCCGTCCACTGTAGCAGCGTTCCTTCAGATCCGCTTCTCGGGGTTTGGTCAGAATAAGGAGCTGGGTATGTTATGGCGTAATGCGGTTTTTGCTATCCTGTGGTGTGTTTGGTTGGAAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_204888.p1 GENE.R_Transcript_204888~~R_Transcript_204888.p1 ORF type:internal len:180 (+),score=10.49,zf-RVT|PF13966.2|5.6e-20,zf-RVT|PF13966.2|1.6e+04 R_Transcript_204888:2-538(+)
RDCEVEELSSLLAVLEGVTLSNEEDRRSWMGDPSGLFSCGSFLRCLQSSTGGNSFPLARFIWKAKAPFKVRAFIWTLVLGRINTNDMRQRRRPYSCLSPDICVMCGESGETATHLFLHCPVARVLWASLFGVRGEALVCPSTVAAFLQIRFSGFGQNKELGMLWRNAVFAILWCVWLER

Click here to download the sequence:
Link to NCBI Protein BLAST