Transcript Information: R_Transcript_20496.p1


Annotated TAIR IDAT3G05070.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1416480-1417533 | Forward length=144
E-Value1.4E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 197.349125091833
Replicate 295.92427445093
Replicate 3117.078881047
Condition 2: 8 Hour
Replicate 184.340201484956
Replicate 274.974721467505
Replicate 390.402139168202
Condition 3: 24 Hour
Replicate 1105.93602550823
Replicate 296.149396601406
Replicate 395.132834096645


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20496.p1 GENE.R_Transcript_20496~~R_Transcript_20496.p1 ORF type:complete len:153 (+),score=57.90,cwf18|PF08315.8|2e-32 R_Transcript_20496:185-643(+)
ATGTCTGCTGAAGAAGAATCGATTGAACATGCAGCAAGAGAGAGGAGAGAGAGACTTAGGGCTTTGAGAGCTGCTAAAGAACTATACGAAACTCCTGATGATGAAGATTCTTCCACTCAACCTCAAAATGGCGATCCTTCTAATAACGATGATAATGATGGTCTTAAGTTGAAATTTCGAAACTATCTTCCTCATGACAAAGAACTTCAGGAGGGTAAACTTGCTGCTCCGGAGTTACCGAAATTTGAGGATCCTGTTGCAACAGCTCCTCCACCTGAGAAAAAAGAGGATCCATTGTTGAACATTGCACCAAAAAAACCGAACTGGGATCTCAAGAGGGATGTGCAAAAAAAGCTGGACAAATTGGAAAGGCGGACACAAAAGGCATTGTATAAGCTCATGGAGGAACAAGAGAAACAAAGGCAGCTGGAGGATGAGAATGTTGTCTCTGAAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20496.p1 GENE.R_Transcript_20496~~R_Transcript_20496.p1 ORF type:complete len:153 (+),score=57.90,cwf18|PF08315.8|2e-32 R_Transcript_20496:185-643(+)
MSAEEESIEHAARERRERLRALRAAKELYETPDDEDSSTQPQNGDPSNNDDNDGLKLKFRNYLPHDKELQEGKLAAPELPKFEDPVATAPPPEKKEDPLLNIAPKKPNWDLKRDVQKKLDKLERRTQKALYKLMEEQEKQRQLEDENVVSED*

Click here to download the sequence:
Link to NCBI Protein BLAST