Transcript Information: R_Transcript_20503.p1


Annotated TAIR IDAT5G63830.1
Annotated Gene NameHIT-type Zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25543585-25544802 | Reverse length=405
E-Value2.7E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7489861510452
Replicate 25.4151042436195
Replicate 37.4126425797768
Condition 2: 8 Hour
Replicate 17.8044970999735
Replicate 29.3034325908582
Replicate 39.1420520642825
Condition 3: 24 Hour
Replicate 110.166230937815
Replicate 26.2785043557118
Replicate 38.7337799723873


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20503.p1 GENE.R_Transcript_20503~~R_Transcript_20503.p1 ORF type:complete len:411 (+),score=89.91,zf-HIT|PF04438.12|9e-11,zf-HIT|PF04438.12|5.4e+03,zf-HIT|PF04438.12|7.6e+03 R_Transcript_20503:117-1349(+)
ATGGCGATGGAGGACACAATAGCTACATCTGAGAATCCCTCAACTTCTTCTCAGTTCAGCTCTGCTTCTCGCGTCATCTGTCGCGTATGTCAAAAGCAATTTTCACAGTATACTTGTCCTCGCTGCAATACCAGATACTGCTCACTTCACTGCTACAAGTCTCATAGCCTACGATGTACTGAATCCTTTATGCGAGAGAATGTTGTGGATGAGCTGAGGCAGTTGCGCCCAGATGATGAAAGCAAGAAAAAGATGTTGGAGATACTAAAGAAATTTCATGCTGAAGATGAGGAGGATAGTATGGATGAGGACGAGCCGAGTCTTTCAGAGGAGACGATCCAAAAGGTTCTATCAGGAGGCAAACTTAGTTATGATGACTTAACTGCTGAAGAGAAGAAACTTTTCCAAAGAGCTATTGCATCTGGAGAGTTAAGTAAGATGATTGAACCATGGGAGCCATGGTGGTTGAAGCCTTCTGCTCGAGCAATATCCCTTGGCCAGGAGGGAGCCCGGCTCATACAGTCCGTAGCTAGTGAAGGAACAACAGGATCCCATCAAGATGATTCACAACATGAGCGAGCTAGTGAAATACCAGCTGGGCCAGAAGCACCATTGCCACCACTCAGTAAACTCACCACTGTGGAGCCATCCCCACTTCTTGCCATTTTTCTGGTCGACATCTTATACAGCTATTGCTTCACCCTTCGTCTTTATAATGGGGATTGGCAATCAGATTCTGCTGGAGCTTCTATGGTGGTTTTTAGCGTGTCCTCCGTTTTGGGCCAAAGAGCACAGCCAGAATCCATGCTAGAAGCTGTAACATATTGCTTGGAGCAGACTTGTTCTCCATCCTTTAGAGACATGGGAGGTCTGGAGTTCGGACTTGGTGTTCTCGATGATGTGACAGTCCTACTTTCCTTGGGAGGAGCTGCCCTGATTTGCGCACTTTGTGACCTACAAAGGCTGATTCAGGCAGCTTTCAGAGAGCTTAAATCAGAGAAGCCACGAAGAGCGAAGAGGGCAGAAATCAGGGGCAAGCTCAAGCCTGCAGAAAGAAAAATTTACTTCATTATGTGTTGGGTGCATGAGCAACAAGAGGAAGTTTGGTCTTCCTTGGAAGTGCTTGTTAAGGCAGAAAAGGCTTCAGCATTGGAGTATAAAGGCAATGTTAGAAGTTCCTCAAAGACGGAGGAGGCAAACAGTAAAAGCAAGGCTCTAATTGAGGAGGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20503.p1 GENE.R_Transcript_20503~~R_Transcript_20503.p1 ORF type:complete len:411 (+),score=89.91,zf-HIT|PF04438.12|9e-11,zf-HIT|PF04438.12|5.4e+03,zf-HIT|PF04438.12|7.6e+03 R_Transcript_20503:117-1349(+)
MAMEDTIATSENPSTSSQFSSASRVICRVCQKQFSQYTCPRCNTRYCSLHCYKSHSLRCTESFMRENVVDELRQLRPDDESKKKMLEILKKFHAEDEEDSMDEDEPSLSEETIQKVLSGGKLSYDDLTAEEKKLFQRAIASGELSKMIEPWEPWWLKPSARAISLGQEGARLIQSVASEGTTGSHQDDSQHERASEIPAGPEAPLPPLSKLTTVEPSPLLAIFLVDILYSYCFTLRLYNGDWQSDSAGASMVVFSVSSVLGQRAQPESMLEAVTYCLEQTCSPSFRDMGGLEFGLGVLDDVTVLLSLGGAALICALCDLQRLIQAAFRELKSEKPRRAKRAEIRGKLKPAERKIYFIMCWVHEQQEEVWSSLEVLVKAEKASALEYKGNVRSSSKTEEANSKSKALIEEV*

Click here to download the sequence:
Link to NCBI Protein BLAST