Transcript Information: R_Transcript_205040.p1


Annotated TAIR IDAT1G68180.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25554816-25555562 | Forward length=248
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.077572791594
Replicate 22.3898228116112
Replicate 31.1174018339587
Condition 2: 8 Hour
Replicate 10.79628829096732
Replicate 22.1815494479205
Replicate 33.8369258221956
Condition 3: 24 Hour
Replicate 11.8664883924963
Replicate 20.53793314367262
Replicate 30.53384645577798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_205040.p1 GENE.R_Transcript_205040~~R_Transcript_205040.p1 ORF type:complete len:123 (+),score=1.53,zf-RING_2|PF13639.2|5.6e-11,zf-rbx1|PF12678.3|3.4e-07,zf-RING_11|PF17123.1|8.9e-07,zf-C3HC4|PF00097.21|3.9e-06,zf-C3HC4_2|PF13923.2|6.9e-06 R_Transcript_205040:238-606(+)
ATGGCAATCTATCACAATACCGGTCTTTTTGATCTAGACGAAGCACTATCTACGCCATTGCATCTAGTAAACTTCCCAAGCCCCATGAATGTCACAACATTGAGCAATAATAATAATATTCCTTTAAGCTTTAGGGTCGATCAAATGCTCGAGACGCCTTTAATGATGTCGTTTCCAGTTGTTATGCCTCAAAACGACGTGCTATGTTCGGTCTGCATGGAGAACTTTAAGCCGCCACGTAATGGTTTCGGTAGGCAAATCAGATGTGGCCACGTTTACCATGCCCATTGTATTGCCACGTGGCTCTCTGTGTGTAAAACTTGTCCTCTTTGCCGGGTGACGGTGGATGACCCAAAGGAAGGTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_205040.p1 GENE.R_Transcript_205040~~R_Transcript_205040.p1 ORF type:complete len:123 (+),score=1.53,zf-RING_2|PF13639.2|5.6e-11,zf-rbx1|PF12678.3|3.4e-07,zf-RING_11|PF17123.1|8.9e-07,zf-C3HC4|PF00097.21|3.9e-06,zf-C3HC4_2|PF13923.2|6.9e-06 R_Transcript_205040:238-606(+)
MAIYHNTGLFDLDEALSTPLHLVNFPSPMNVTTLSNNNNIPLSFRVDQMLETPLMMSFPVVMPQNDVLCSVCMENFKPPRNGFGRQIRCGHVYHAHCIATWLSVCKTCPLCRVTVDDPKEGL*

Click here to download the sequence:
Link to NCBI Protein BLAST