Transcript Information: R_Transcript_205045.p1


Annotated TAIR IDAT5G01980.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:375542-377023 | Forward length=493
E-Value5.1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.42542837391532
Condition 3: 24 Hour
Replicate 10.35871573793288
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_205045.p1 GENE.R_Transcript_205045~~R_Transcript_205045.p1 ORF type:complete len:128 (-),score=9.52,zf-RING_2|PF13639.2|2.2e-11,zf-RING_2|PF13639.2|1.8e+03,zf-rbx1|PF12678.3|1.7e-09,zf-rbx1|PF12678.3|3.4e+03,zf-C3HC4_2|PF13923.2|2.1e-07,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4|PF00097.21|2.2e-06,zf-C3HC4|PF00097.21|1.6e+04,zf-RING_11|PF17123.1|4e-06,zf-RING_11|PF17123.1|1e+04 R_Transcript_205045:43-426(-)
ATGGAGAAAGTTAACTACTCATTTGATGGAGTTTTCGATCTTGATGAAGCTCTTACTATGCCATTACCATCTGTAAACGACGCCGTTTACAGCTTCTTAAGTATCCCAACATCGAAGTTGCAAGAGATTCCACTAACGATGACAACATTTCCAGCAGTTTCGACACCAAACGACGCCGTTTGCACCGTCTGCAAGGAGAGCTTTAACCCGCCACATCAGACATCTAGGCAAATCCCTTGTGGACACGTGTACCATGCCCATTGTATTGCCACGTGGCTCTCCGTTGGTAATTCTTGCCCTCTTTGTCGACTTGCTGTCGTTGACCTGTTGGAACTCTGCCTCTTGCCCTTCCTCTACGACGACGACTGCTGCCTCTGTCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_205045.p1 GENE.R_Transcript_205045~~R_Transcript_205045.p1 ORF type:complete len:128 (-),score=9.52,zf-RING_2|PF13639.2|2.2e-11,zf-RING_2|PF13639.2|1.8e+03,zf-rbx1|PF12678.3|1.7e-09,zf-rbx1|PF12678.3|3.4e+03,zf-C3HC4_2|PF13923.2|2.1e-07,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4|PF00097.21|2.2e-06,zf-C3HC4|PF00097.21|1.6e+04,zf-RING_11|PF17123.1|4e-06,zf-RING_11|PF17123.1|1e+04 R_Transcript_205045:43-426(-)
MEKVNYSFDGVFDLDEALTMPLPSVNDAVYSFLSIPTSKLQEIPLTMTTFPAVSTPNDAVCTVCKESFNPPHQTSRQIPCGHVYHAHCIATWLSVGNSCPLCRLAVVDLLELCLLPFLYDDDCCLCH*

Click here to download the sequence:
Link to NCBI Protein BLAST