Transcript Information: R_Transcript_20513.p1


Annotated TAIR IDAT2G15690.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:6831855-6833594 | Reverse length=579
E-Value1.4E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.283242560282
Replicate 28.7005217478495
Replicate 310.865010811874
Condition 2: 8 Hour
Replicate 110.56581843614
Replicate 210.835838289479
Replicate 315.416436417315
Condition 3: 24 Hour
Replicate 115.99970469465
Replicate 214.993044143081
Replicate 316.003510104975


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20513.p1 GENE.R_Transcript_20513~~R_Transcript_20513.p1 ORF type:complete len:584 (+),score=129.45,DYW_deaminase|PF14432.2|2.1e-32,PPR_2|PF13041.2|9.3e+03,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|3.1e-05,PPR_2|PF13041.2|47,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|0.074,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|89,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|5.8e+03,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|7.5 R_Transcript_20513:114-1865(+)
ATGGCATCTCTCATAGCAGCTCGTCCTCCATCAATCTCATCTCTCTTCAAGGTTCGTTCTTTAAACCCTTCTCGCCATTTCTTCTTCTTAAACCCTAATTCCTCAAAACCCCAGTCTTCCTCTTTCAAACCTCTCTCCACCTCTGCTACTTTCCCTAACAATTACAACTATTCCCCTCAATCTAACAACCCTTCTTATCATCAAAACCCAAATCCCAATCCGGGTCATCCTAATACTAATTGGTACCCCCAAAATGGACCCCAAAACCGTAATTTCATCCCAAACAATTATCAACAACAACAACAACCCAGAAACCCTAATCAAATGGGCAACCAAAATCAAGCTTACCCACTTCATAGAAGCCCTAATCAAGGATACCCACCTGGCCAATCTCCCAATCAAGGTAACCCTTTGCAGCAAAACCCTAATTTTATCCCAAACAACCAACAACAACCCAGAACCCCAAATCAGATGGGCAACCAAAATCAAGGTTACCCACTTCATAGAAACTCTAATCAAGGATACCCAAATGGTCAAAATCCCAACCAAGGTTACCCTTTACCTCCACCACCACCACCTCCTAGAAACAGCAATAATCAGGTTCAAAGTCAACAGGGTTTAGTTCAGGGTCAAAATGTGGATTTGATGGGCATGGCCATGGAGGGGAAAGTTAAGGATATAATTGAGTTGATGGAGAAAGGAGCTAAGGCTGATAATGGGGAGTGTTTCTTTGTTTTGTTTGATAAGTGTTCGAACCCGAAGTCGCTTGAGAGTGCAAAGAAGGTTCATGATTTCTTCCTTAGGTCGACGTTTCGAGGGGATGTTAGGTTGAACAACAAGGTACTGGAAATGTATGGTAAATGTGGAAGTATGATTGATGCACGCCGGGTGTTCGATCATATGCCTGAGAGAAATATTGAGTCTTGGCATTTGATGATTAAGGGGTATGCTAGCAACTCATTAGGGGATGAGGGGTTGCAGTTGTTCGAAAAGATGAAGGGGCTAGGATTGCGGCCCACTAGTGAGACGTTTGTGGCTGTTTTGGCTGCATGCTCGGGTGCTGAGGCTGTGGAAGAAGGGTTCTTGTATTTGGAGAAGATGAGGAGTGAGTATGGGATTGAGCCTCAGGTTGAGCATTACTTGGGGGTGCTTGACGTGATGGGTGCTTCAGGCCATCTTGTAGAGGCAAGGGAGTATATCGAGAACTTGCCAATGGGGCCGAGTGTGGTGTTTTGGGAAGCTTTGAGGGATTATGCTAGGATTCATGGTGATATTGATCTTGAGGACCACATTGATGAGTTAATTGTTAGTCTCTATCCTTCAAGGGGTGTTACTAATAAAATCCCTGCTCCACCTCCGAAGAAGCGAATGGGTGTGAATATGATGGAAGGGAGGAACAGGCTTCCTGAGTTTAAGAACCCGACTCTATACAAGGATGATGAGAAATACAAGGCGGCGTTGAAGGAACAAGGTTATGTGCCCGACACTAGATATGTTCTCCATGATATTGATCAGGAGGCGAAGGAGCAGGCTTTGCTGTACCATAGTGAGAGGCTGGCTATTGCTTATGGTTTGATCAGTACCCCGCCAAGAACACCTCTTAGGATCATTAAGAACCTTCGGATTTGTGGTGACTGTCACAATGCCATTAAGATCATGTCTAAGATTGTTGGAAGGGAGTTGATTGTTAGGGACAATAAGCGGTTCCATCATTTCAAGGATGGCAAGTGCTCTTGTGGGGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20513.p1 GENE.R_Transcript_20513~~R_Transcript_20513.p1 ORF type:complete len:584 (+),score=129.45,DYW_deaminase|PF14432.2|2.1e-32,PPR_2|PF13041.2|9.3e+03,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|3.1e-05,PPR_2|PF13041.2|47,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|0.074,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|89,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|5.8e+03,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|7.5 R_Transcript_20513:114-1865(+)
MASLIAARPPSISSLFKVRSLNPSRHFFFLNPNSSKPQSSSFKPLSTSATFPNNYNYSPQSNNPSYHQNPNPNPGHPNTNWYPQNGPQNRNFIPNNYQQQQQPRNPNQMGNQNQAYPLHRSPNQGYPPGQSPNQGNPLQQNPNFIPNNQQQPRTPNQMGNQNQGYPLHRNSNQGYPNGQNPNQGYPLPPPPPPPRNSNNQVQSQQGLVQGQNVDLMGMAMEGKVKDIIELMEKGAKADNGECFFVLFDKCSNPKSLESAKKVHDFFLRSTFRGDVRLNNKVLEMYGKCGSMIDARRVFDHMPERNIESWHLMIKGYASNSLGDEGLQLFEKMKGLGLRPTSETFVAVLAACSGAEAVEEGFLYLEKMRSEYGIEPQVEHYLGVLDVMGASGHLVEAREYIENLPMGPSVVFWEALRDYARIHGDIDLEDHIDELIVSLYPSRGVTNKIPAPPPKKRMGVNMMEGRNRLPEFKNPTLYKDDEKYKAALKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST