Transcript Information: R_Transcript_205188.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31095333824052
Replicate 20.17884412620356
Replicate 30.62437444895816
Condition 2: 8 Hour
Replicate 10.29199498233512
Replicate 20.45712194564604
Replicate 30.24738140538858
Condition 3: 24 Hour
Replicate 10.19555202067891
Replicate 20.11271852925338
Replicate 30.18643700755449


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_205188.p1 GENE.R_Transcript_205188~~R_Transcript_205188.p1 ORF type:internal len:587 (+),score=32.08,RVT_3|PF13456.2|5.6e+03,RVT_3|PF13456.2|1.4e-17,RVT_1|PF00078.23|3.4e-17,RNase_H|PF00075.20|1.7e-06 R_Transcript_205188:3-1760(+)
CCTAAGGATTGTTTCCCACTGCCACATATTGACATGCTGGTCGATAACACGGCTGGTCATGCTATGTTCTCATTCATGGATTGGTTTTCTGGCTACAATCAGATACTGATGGCAGTTGAAGATATGACCAAAACCTCATTCATCACGCCCTGGGGAACTTATTGCTACAAAGTCATGCCTTTTGGGCTTAAGAACGCAGAGGAAACCTATCAGAGGGCGGCAACCACTATTCTCCACGATCTCATTCACAAAATTGTGGAAGTTTATGTGGACGATATGATAGTGAAAAGCCAAACACGGGAGGGTCATCTGCACGCCCTTCGTACCTTTTTTGAAAGAATACGCAAGTGTCATCTTCGACTCAACCCGCGAAAGTGCGCATTTGGAGTAACATCAGGTAAATTGCTCGGATTTGTGGTAAGCCAGAAAGGAATCGAGGTGGATAGCGACGAGGTCAAGGCCATAGTTGAGTTGTCACCTCTGAACGCAGAGAAGGAGATTCGAGGGTTTCTAGGTCGAATCCAATATATCAGCAGATTCATTTCCCAACTGACCACCAAGTGCGAACCGATTTTTAAGTTGCTCAAAAAAGGGGCGTCTCACGAGTGGAATGATGAATGTCAAGAGGCATTCGATTCGATGAAGAAGTATTTGATGAACCCGCCTGTTTTGATGCCCCCGAGGCCTAACGAGCCATTAATTTTATACTTGACGGTGACGGAAACAGCCATGGGTGCCTTTCTAGCTCAGTATCAAGAAGGAACTAGGAATGAAATAGCAATTTTCTACTTGAGCAAGAAGTTTCTGGGGTATGAAACGCGATACACACCACTAGAAAGGACTTGTGTATCTCTCGTGTACGCCAAAAAGAAGCTAAGGCATTATCTGCAATCGCATACGACGTACTTGGTCTCGAGATTAGATCCTATTAAATACTTGTTCGAAAAGCCAGTTGTAAGTGAGAGGCTTGTTAGGTGGCATTTAATGCTTTCTGAGTTCGGTCTTCGGTGCGTCAGTCAGAAGTCAGTTAAGGGAAGAGCCATGTCGGAGATGTTAGCAGATTGTCCTGCGTCGGGGGATGAATTCGAAGACGATCTCCCTGATGAGCATCTCATGAATATCAATGAAGGAGATTGGAGAATGTATTTCGATGGGGCGTCAAACCGAAGAGGTAACGGGATTGGAGTGCTGTTGATTAGTCCTGAAGGTCTCCATCTACTTTTCTCGGTCAAACTCGACTTCCCAACCACCAATAATACGGCGGAATATGAAGCTTGCATTTATGGCCTTAAGGTTGCTCTGGCTGCAGGGGCAAGAAGACTGCTGGTATACGGGGACTCGAATTTATTAATATCTCAGACCATAGGAGCTTGGAAGGTCCGAGATGAAAGACTTCAGTTGTATGCAGAATGTTTGGAAGGACTGGTCCCACAATTCGAATGCATCGTCTTCCGTCACTTGCCGCGAGAGCAGAATAGTTTTACGGACGCACTAGCTAATCTCGCAATGATCCTAGAATGGGAGAATGGCATACAAGCCCAATCAATTACTTTGGAAGAAAAGAAGGAGCCAACAGTAGGGTGTTTTAACATTAGCGAAGAGCAAAACGATGAACCATGGTATGTTGATGTAGTAAAATTCCTAGAGGACCACACCTATCCGTTGGAGAGCTCAAAGAAAGACCAGCTGGCCATCCGGCGCTTAGCCACTCATTTTGTTTTATTGGGAAAACGGCTATATCATAAAAGCCAAGACGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_205188.p1 GENE.R_Transcript_205188~~R_Transcript_205188.p1 ORF type:internal len:587 (+),score=32.08,RVT_3|PF13456.2|5.6e+03,RVT_3|PF13456.2|1.4e-17,RVT_1|PF00078.23|3.4e-17,RNase_H|PF00075.20|1.7e-06 R_Transcript_205188:3-1760(+)
PKDCFPLPHIDMLVDNTAGHAMFSFMDWFSGYNQILMAVEDMTKTSFITPWGTYCYKVMPFGLKNAEETYQRAATTILHDLIHKIVEVYVDDMIVKSQTREGHLHALRTFFERIRKCHLRLNPRKCAFGVTSGKLLGFVVSQKGIEVDSDEVKAIVELSPLNAEKEIRGFLGRIQYISRFISQLTTKCEPIFKLLKKGASHEWNDECQEAFDSMKKYLMNPPVLMPPRPNEPLILYLTVTETAMGAFLAQYQEGTRNEIAIFYLSKKFLGYETRYTPLERTCVSLVYAKKKLRHYLQSHTTYLVSRLDPIKYLFEKPVVSERLVRWHLMLSEFGLRCVSQKSVKGRAMSEMLADCPASGDEFEDDLPDEHLMNINEGDWRMYFDGASNRRGNGIGVLLISPEGLHLLFSVKLDFPTTNNTAEYEACIYGLKVALAAGARRLLVYGDSNLLISQTIGAWKVRDERLQLYAECLEGLVPQFECIVFRHLPREQNSFTDALANLAMILEWENGIQAQSITLEEKKEPTVGCFNISEEQNDEPWYVDVVKFLEDHTYPLESSKKDQLAIRRLATHFVLLGKRLYHKSQDG

Click here to download the sequence:
Link to NCBI Protein BLAST