Transcript Information: R_Transcript_20526.p1


Annotated TAIR IDAT1G13220.2
Annotated Gene Namenuclear matrix constituent protein-related
Annotated Gene Symbol(s)LINC2
Annotation TypeOrtholog
Chromosome Positionchr1:4515699-4520071 | Forward length=1128
E-Value2.2E-235
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.88045154748
Replicate 216.591362288144
Replicate 315.894470985085
Condition 2: 8 Hour
Replicate 113.232361302103
Replicate 214.475248408212
Replicate 315.365894051707
Condition 3: 24 Hour
Replicate 117.560379895803
Replicate 212.89107376788
Replicate 317.760308945939


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20526.p1 GENE.R_Transcript_20526~~R_Transcript_20526.p1 ORF type:complete len:1225 (+),score=410.72 R_Transcript_20526:174-3848(+)
ATGTTCACACCTCAAAGAAAAGCGCCATGGACTCCAGCCACCTCCACTCCAAGAACCGACTCCAGGACCACCCCCTTGGCCGTTTACAAAGGCAAAGCCGTTGCCTATATCGATGGCCCACCGGCACCACCTCCCCCATTGGGCTATTTGGGCTCCGACAGTTTAGGCCAGGCTTTAACGGGCCGTAATTCCGACGACTGGAAGAAGTTTAAGGAGGCTGGGCTCTTGGATGAATTGGCTCTTGGGAAGAAAGATCACGAGGCTTTGCTTGACAAGGTTTCGCGCCTCGAAACTGAGCTTTTCGACTACCAATACAACATGGGGTTGCTGCTTATTGAGAAGAATAATCTCGCTGCCAAGACTGAAGAAATGGGGCAGCAAGTATCTGAGGTTCAAGAGATCCTTAAGCGGGAGCAAGCTGCTCATCTGATTGCTATCTCAGAAGCTGGAAAGCGTGAGGATAATTTGAAGAGGGCATTGGATGTTGAGAAGAAGTGTGTGATTGACCTTGAGAGAGCATTACGTGATATGCGTGAAGAACATACAAAAATTAAGGATTCATCTGAAGGATCTGTGGCTGATGTTAATGCTCGTATTGAAATGTTGGAGCAAAGAAGCCTGGAGTTGGAAGGCAAGTCTCATTCAGTGAATGCAAGACTTGCTGAGGCAGACAGAAAGACATCCGAGTTAGACAGACAACTGCAAGATTTGGAAACTCGTGAAAGCATTCTGAAGAGGGAGCGTCTAACATTAACCCAAGAACGAGAAGCCCATGAGTCATATTTCCGGAGACAGAAGGAAGATTTGCTCGAGTGGGAGAGAAAACTGCAAGAAGCAGAGCAGAGGCTTTGTGACAGTCGGAGAACCCTTAATGAGCGGGAAGAGAAACTACATGAAACTGATAGGACTTGCAAGCAAAAGGAGATTAAGCTTCAAGAGCTGCAACAGAAGATTGATTTGGCTAATGCCACTTTGAAAAAGATGGAAAGCGAGATAAACAATCAATCAGCGGAATTGGAGTTGAAAGAGAAGAAAGCTGAAGCTCTGAGATGTGACCTAGAGATGAGGGAGAATCAACTGAAGGAGAAGGAAGAAGGGCTTAATGCAAGAGAAACAGTGGAGTTGCAGAAGCTCCTTAATGAGCACAAGTCTAAACTTGATGCCAAAATGCATGAATTTGAGTTTGAGATGAAGCATAAAAGAAAATCTGTTGAGGAGGAATTGAAAAGCTATAGAGAAGATGTGTGTCAGAAGGAAAGTGAAATTAATCATCTTGAGGTGAAACTTGGCAAACGGGAACAAGCACTGGAGAAAAAGGCTGAGAGGGTCAAAGAGAAAGAGAAGGACGTTGAAGCAAAGGCCAAAACCTTGAAGGAGCAAGAAAAATGTCTCAAAGCGGAAGAGAAAAAACTGGAGGCAGAGAAGAAACAACTGAACACTGAGAAAGAGCGCCTGGAGAATTTAAAAGATGAGATTGAAGGATTGAGGACTGAAATGAGGAAACACCAACTGCAGATTGAAGAAGAGAGAACAAAGCTTACAAATGCAGAAGAAGAGAGGTTAGAGTATCTTCGTCTGCAGTCATGTTTAAAGCAGGAGACGGAGAATGTTAGGCGTCAGAGCGAGGTAGTTGTGAAGGAAGCTGAGGATCTGAGGCTGGAACGAGAGAAGTTTGAGAAAGATTGGGAGGCATTGGATGACAAACGAGCTGGCGTGGATAATGAGCTTAAGACGCTTGCTGAAGAGAAAACAAGATATGAGAAGTTACGGAGCTCAGAGGAAGAGAGTTTGAATAAGAAGTACATGGAGGCCGAACAGTATATTCAGCAGGAGAGGGAGAGCCTCAGACTAGAAAAAGAATCGTTTGAAGCCACCATGAAGCATGAGAAGCTAATGTTATCTAAAAAGGCTGAAAATGAGCACAGCCTAATGCATCAAGATTATGAACAGCGGAGACAGAAACTTCATCATGATATGCAGAAGAGACAGAATGAATGGGAGAAGATGGTAGAGGAAAAGGAGAGAGCGTTTGAAGAAATGAGGTTGAGAGAAATGAGAAACATCAATCACTTGAAGGAAAATGCTGAGAAAAAGAAGGAAGAAATGGAAACTGAAAGGCGACGGATGGAAAAAGAAATGCGGGAACTAGAAGTCAACAAGCAGCAACTTGAAGAGACCAGTATTGATATATCCAAAGATATTGAGGCTCTTGATAATCTTAGTAAAAAGCTGAAGAACCAGCGGGAAGAGTTGATCGCTGAAAGAGCCAATTTTGGTGCTCTCATTGAGAAGATTAAGAGGTGCACTAATTGTGGAGATTTTGCGCAGACATTTCTCCTTCACGATCTCCAGCTACCCACTGTGGATGGCTCTAATCATTTGCCTGGACATTCTCATGATGATCAGAAGGATGCCAAACATGATCAGAAGGTATCTTCAGTGGGACTTAGTGGAGGTTCTTCTGAGTTTGGAGGGAAGAGAAGCATTTTTCGAAGATGTGCATCAATCATCTTTCGTTCACCCCCAAATAAAGGGAGTCAAGATGCTGATGATCATATTGTGCAAGAATCTCCGAAGTCTGCTGTGCATGTTCGTGCTGATGAAGTAATTGCAGGGGCACCTACTCCTGGTCATGATGAGCCAGGACCATCATTTGTAGTAAACGACTCTTTGAAGAATTTGCAGCGAGATGTTAGTGTTAAAGGAGATAATGTTGACCATGCTCCTTCTGTTGATGACTCCAATATTGGCAGCGAAATTCAAGACATTCAGGAGCCTGAGATGTCTGATGTTAAGAGTGACAGGCGGAAACCTGGACGAAAACGTGGGTCTGGAGTTCGGAGGACGCGTTCTGTTAAAGCAGTGGTTGAGGAAGCCAAGGCTTTTCTTGGGGAGAGCTCCGAGGGAAAGATGGCAGAACTAAATGGTTCAGCAGGTGCTAATGCAAGGAACCTAGAAATAGCGCACGCTGACATGGCTCTTGCCTCTGGTGCCCGTAAGCGGAGTCATTCACAGGCCTCTAGAATGACGGAAAGTGAACAGGATATTGATTATAGTGATGGAAGGGCTGATAGTGTCACAACTGGTGGTCGCAGGAAAAGGAGACAGACTGTTTCCTCTGCCTTACCTACTCCTCGTCAGAGGCGTTACAATCTTAGGCATCATACAACTGCAGCAACAGCCAGTGCAGGACAAGAGGCAAGTCTCAAGACCAAGAAAGGTGGTGGAGCTTCTGATGAAGATGGTGCTAATCAACCTGCGCCAAACCCTGAAACAGCACCCTCCCAATCATTGGATGTCACTGCCGAAAGTGACAGAAGATACCATTTGGTACAAGTTTCCACCACTAGAAGTGTCGAGTTTTCGTCTGATAAGATTGTCAGGTTTGATACAGCAGTCAAGGTAGTTGACAGCAATGTTGATGCTACAAAATCAGTAGAGAATACTTTGTTGAGCGGAGAAGTAAAATCAGCTGAAAATATGGCGTTGAGTGAAGAGGTCAATGAGACTTCAGAAAATGTCGAGGAAGATGATAATGACAGCATATTTCATGAAAATGAGGACGACAATGATGGTGAAGATGAGGCAGGCGAAGATGATGACGACGACGACGACGATGATCATCCTGGTCAAGCGTCCATTGGGAATAAGCTGTGGAAGTTTTTTACAACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20526.p1 GENE.R_Transcript_20526~~R_Transcript_20526.p1 ORF type:complete len:1225 (+),score=410.72 R_Transcript_20526:174-3848(+)
MFTPQRKAPWTPATSTPRTDSRTTPLAVYKGKAVAYIDGPPAPPPPLGYLGSDSLGQALTGRNSDDWKKFKEAGLLDELALGKKDHEALLDKVSRLETELFDYQYNMGLLLIEKNNLAAKTEEMGQQVSEVQEILKREQAAHLIAISEAGKREDNLKRALDVEKKCVIDLERALRDMREEHTKIKDSSEGSVADVNARIEMLEQRSLELEGKSHSVNARLAEADRKTSELDRQLQDLETRESILKRERLTLTQEREAHESYFRRQKEDLLEWERKLQEAEQRLCDSRRTLNEREEKLHETDRTCKQKEIKLQELQQKIDLANATLKKMESEINNQSAELELKEKKAEALRCDLEMRENQLKEKEEGLNARETVELQKLLNEHKSKLDAKMHEFEFEMKHKRKSVEEELKSYREDVCQKESEINHLEVKLGKREQALEKKAERVKEKEKDVEAKAKTLKEQEKCLKAEEKKLEAEKKQLNTEKERLENLKDEIEGLRTEMRKHQLQIEEERTKLTNAEEERLEYLRLQSCLKQETENVRRQSEVVVKEAEDLRLEREKFEKDWEALDDKRAGVDNELKTLAEEKTRYEKLRSSEEESLNKKYMEAEQYIQQERESLRLEKESFEATMKHEKLMLSKKAENEHSLMHQDYEQRRQKLHHDMQKRQNEWEKMVEEKERAFEEMRLREMRNINHLKENAEKKKEEMETERRRMEKEMRELEVNKQQLEETSIDISKDIEALDNLSKKLKNQREELIAERANFGALIEKIKRCTNCGDFAQTFLLHDLQLPTVDGSNHLPGHSHDDQKDAKHDQKVSSVGLSGGSSEFGGKRSIFRRCASIIFRSPPNKGSQDADDHIVQESPKSAVHVRADEVIAGAPTPGHDEPGPSFVVNDSLKNLQRDVSVKGDNVDHAPSVDDSNIGSEIQDIQEPEMSDVKSDRRKPGRKRGSGVRRTRSVKAVVEEAKAFLGESSEGKMAELNGSAGANARNLEIAHADMALASGARKRSHSQASRMTESEQDIDYSDGRADSVTTGGRRKRRQTVSSALPTPRQRRYNLRHHTTAATASAGQEASLKTKKGGGASDEDGANQPAPNPETAPSQSLDVTAESDRRYHLVQVSTTRSVEFSSDKIVRFDTAVKVVDSNVDATKSVENTLLSGEVKSAENMALSEEVNETSENVEEDDNDSIFHENEDDNDGEDEAGEDDDDDDDDDHPGQASIGNKLWKFFTT*

Click here to download the sequence:
Link to NCBI Protein BLAST