Transcript Information: R_Transcript_20558.p1


Annotated TAIR IDAT3G01160.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUC153 (InterPro:IPR012580); Has 36638 Blast hits to 21323 proteins in 1057 species: Archae - 109; Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses - 489; Other Eukaryotes - 13360 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:54655-57449 | Reverse length=713
E-Value1.3E-213
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.437792886314
Replicate 213.854116258295
Replicate 314.926931466345
Condition 2: 8 Hour
Replicate 112.142580568101
Replicate 213.807539060404
Replicate 315.423909570875
Condition 3: 24 Hour
Replicate 117.876981037966
Replicate 215.72793052033
Replicate 316.714790874284


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20558.p1 GENE.R_Transcript_20558~~R_Transcript_20558.p1 ORF type:complete len:732 (+),score=194.05,NUC153|PF08159.8|0.82,NUC153|PF08159.8|0.73,NUC153|PF08159.8|6.6e-12 R_Transcript_20558:329-2524(+)
ATGGGGTCGAAGAACAAAAACAAGAACAGGGACAAAGTCGCCGCCAGAGATTCTTCCGGTGCCGGTGATAATGACAACGGAAATGGAAAAAAGTTGATCGCCGATCCTCGATTCTCAAAGGTTCACTCAGACCCGAGGTTCCAGAAGGTTCCGAAGCACAAGGCAAAGGTCTCAATCGACTCTCGGTTCCAACAAATGTTCAGCGACAAGCGTTTCGCTACTTCTTCGGCGCCGCTTGACAAGCGAGGTAAACCTAAGAAGCAGTCAGAGAACGCTCTTCGCAGATACTACCATTTAGAGGACGAAAATGAGGAGAAAGAGAAGAAGAACAAGAGGAAGAGAGAGAAAAAGGAGGAGGAAAGTGAGGAGAATGACAGTGAGTCGAGCGAGTCAAAACTGAGCTCTCAATCGGAATCCGAGTCGGAATCGGAACCGGAGAGTGATGGTTCAACGACCTCCACAACTGACACAGAAGATGAGGCTGATGTCGATATATCAGGAGATGATGATTCTATTGAGGTGGAGAATGTACCAGTAATTGAGAAAGAAACGCATCGATTGGCTGTTGTTAACATGGACTGGAATCAAGTCAAGGCTGTTGATTTGTTGGCGACATTGAAATCTTTCCTTCCAAAAGGAGGGCAAATTAAGTCCGTGGCTGTCTATCCTTCGGAATTTGGTCTCAAGCGTATGGAAGAGGAAGCAGTTCGTGGTCCAGTTGCCTTATTTGATGTTGAGAAGAAAGCGAATGATGAAGATGATGACTGCGATGTGATAGATACTGAAAACCTGCGTGCCTATGAGAGAAGTAAGCTAAGGTATTACTATGCGGTAGTGGAATGTGACTCTATTGCTACAGCGAATTACCTTTACGAAGCTTGCGATGGGGTCGAGTTTGAACGATCATCTAATGTACTGGACTTGAGATTCATACCTGATTCCATGGAATTTAACCATCAGCCACGAGGAGTGGCAACAGAGGTGCCGGCTGATTATGAAGGTTTAGACTTTCATACTCGGGCATTGCAGCACAGCAATGTCCACATCTCTTGGGATGATGATGATCCACACCGTGTGAAGAAATTGAATCGGAAATTTAATGAAAAACAGCTTGAAGAATTGCAGTTAAAGGAATTTTTGGCTTCTGATCAGAGTGAAAGTGATGATGACGAGAATAGTGATGAAGATCCCTCAGAAAAGAAGCTGAAGAAAGCGGATAAGTATCGTGCCCTACTCCAGTCTGGTGATGGTTCAGAGGAAGAGGATAATGAAGGTCAGGATATGGAAGTCACCTTCAATGCTGGCTTAGAAGAATTAAGCCAGAAAATTCTTAAGAAGAAGGATAAAGAATCTGAAAGTGTGTGGGAGGCCTATCTTAGGAAGAGGAAAGAGAAAAAGAAGGCCAGGAAGAATAGATCGAAGAATTCGTCTGACGATGAGAGTGATGAAAGTGATCAGGAGGCTCCTGAACAGCCAGATGACTTTTTTGAGGACGAGCCTTCTGTTCAAAAAGGTGAGAAGCTTGGTCATGGTAAAAAGAAGAGGGAGGAGAAGAGAATCCTGAATGATAAAGTAGCAGAAGCGAGTAAGGCAGAGCTTGAGTTATTACTCGCTGATGAGAAAGCAACAGATAATAATTTGAAGGGATACAAAATAAAACAGAAAAAGAGCAAGGGCAAGAAGGGTAAAGATGCCCCAGATGAAATGAAATTACCCACAGTTGATCATGCTGATCCACGATTCTCAGCTCTCTTCACTAATCCTGAATTTGCTTTGGATCCTACAGATCCTCAGTTCAAAAGGAGTGCAACATTTTTTCGGGAGTTGGCTCAAAAACAACAGAAGAGTCGAGAAGAAGATGCAGAGAAAGAGCCATTACAGTTTCCTAGAGACACTACCAACGGCTCTGCTAAGAGCGAAGACAAGCACAAAGATGGTACTTCACAAAAGGAGAAACATGAGCTATCTACAATCATAAAATCCATAAAGATGAAGTCTCAGCAACTTCCAGCCTCTTCTAGTCGTAAGATAAAACAAGATAAGGCTGAAGTGGAAGGGTCAATCACAAAGGAAAAGAAGCACAAGCTTAAGGATATGTTTGCGGTAAATGGATCAATGGAAAAGGAAGAGAAGCATACGCTTTCAAGCGTAGGACGTCCAAAGAAGAAAAAGGCCAAACTGAAGGATAAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20558.p1 GENE.R_Transcript_20558~~R_Transcript_20558.p1 ORF type:complete len:732 (+),score=194.05,NUC153|PF08159.8|0.82,NUC153|PF08159.8|0.73,NUC153|PF08159.8|6.6e-12 R_Transcript_20558:329-2524(+)
MGSKNKNKNRDKVAARDSSGAGDNDNGNGKKLIADPRFSKVHSDPRFQKVPKHKAKVSIDSRFQQMFSDKRFATSSAPLDKRGKPKKQSENALRRYYHLEDENEEKEKKNKRKREKKEEESEENDSESSESKLSSQSESESESEPESDGSTTSTTDTEDEADVDISGDDDSIEVENVPVIEKETHRLAVVNMDWNQVKAVDLLATLKSFLPKGGQIKSVAVYPSEFGLKRMEEEAVRGPVALFDVEKKANDEDDDCDVIDTENLRAYERSKLRYYYAVVECDSIATANYLYEACDGVEFERSSNVLDLRFIPDSMEFNHQPRGVATEVPADYEGLDFHTRALQHSNVHISWDDDDPHRVKKLNRKFNEKQLEELQLKEFLASDQSESDDDENSDEDPSEKKLKKADKYRALLQSGDGSEEEDNEGQDMEVTFNAGLEELSQKILKKKDKESESVWEAYLRKRKEKKKARKNRSKNSSDDESDESDQEAPEQPDDFFEDEPSVQKGEKLGHGKKKREEKRILNDKVAEASKAELELLLADEKATDNNLKGYKIKQKKSKGKKGKDAPDEMKLPTVDHADPRFSALFTNPEFALDPTDPQFKRSATFFRELAQKQQKSREEDAEKEPLQFPRDTTNGSAKSEDKHKDGTSQKEKHELSTIIKSIKMKSQQLPASSSRKIKQDKAEVEGSITKEKKHKLKDMFAVNGSMEKEEKHTLSSVGRPKKKKAKLKDKN*

Click here to download the sequence:
Link to NCBI Protein BLAST