Transcript Information: R_Transcript_205666.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeHomolog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value8E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0684310561723
Replicate 21.6442885868185
Replicate 35.3817034111443
Condition 2: 8 Hour
Replicate 14.1301458947161
Replicate 23.5023067944026
Replicate 34.8112702849219
Condition 3: 24 Hour
Replicate 14.4256013932924
Replicate 24.2516161716775
Replicate 31.9778046403823


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_205666.p1 GENE.R_Transcript_205666~~R_Transcript_205666.p1 ORF type:complete len:166 (+),score=35.90,Skp1|PF01466.15|6.3e+03,Skp1|PF01466.15|1e-26,Skp1_POZ|PF03931.11|3e-19 R_Transcript_205666:210-707(+)
ATGGCGTCGTCAAAGAAGATAACACTGCAGTGTTCAGATAACGAGACGTTCGAGGTTGACGAAGTGGTGGCGTTAGAGTCGAAAACCTTAAGGCATCTGATTGAGGAAGGGCGTGCTGAGAGCATCATCCCTTTGCCGAATGTTTCGAGCAAGATCCTTGCGATAGTAATCGAGTTCTGCAATATGCGTTCTCAATTTCCTGAGCCTCCTGATGATGATATTTTCTCTGAAGTACTTCCTGTAGATGATGCACTCAAGAAGTTTGAAGCTGACTTCATCAGTGGTGAACAGGCCATTCTCTTAGATCTCATTCTTGCTGCCAACTATCTGGACATTAAGGGCCTGTTGAACTTGGCTTGCAAAAAAGTGTCTCGCATGATCGTAGGAAAGACAGGGGAGGAGATAAGAAATATGTTCAAGATCGAGAATGGGCTTACAGCTGATGAAATGGAAGAGGAGATAAGAAATAAGGTTGTCCACCAGTGGACATTCAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_205666.p1 GENE.R_Transcript_205666~~R_Transcript_205666.p1 ORF type:complete len:166 (+),score=35.90,Skp1|PF01466.15|6.3e+03,Skp1|PF01466.15|1e-26,Skp1_POZ|PF03931.11|3e-19 R_Transcript_205666:210-707(+)
MASSKKITLQCSDNETFEVDEVVALESKTLRHLIEEGRAESIIPLPNVSSKILAIVIEFCNMRSQFPEPPDDDIFSEVLPVDDALKKFEADFISGEQAILLDLILAANYLDIKGLLNLACKKVSRMIVGKTGEEIRNMFKIENGLTADEMEEEIRNKVVHQWTFR*

Click here to download the sequence:
Link to NCBI Protein BLAST