Transcript Information: R_Transcript_205859.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1432740122826
Replicate 20.6348773344021
Replicate 30.74211892860105
Condition 2: 8 Hour
Replicate 10.37019666226937
Replicate 20.72443461688506
Replicate 31.0193129074083
Condition 3: 24 Hour
Replicate 10.64460365866124
Replicate 20.66689767703689
Replicate 31.2763888262337


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_205859.p1 GENE.R_Transcript_205859~~R_Transcript_205859.p1 ORF type:complete len:463 (+),score=60.99,RVT_1|PF00078.23|3.4e-41 R_Transcript_205859:2397-3785(+)
ATGGAAATTCTGGGGTTCTATGGCAAACTTATGGGGACAGCTGCTACTGAACTTCCTATGATAGACAGATTGACAATAAGGAAGGGTCCTGCACTCAACTTAGATCAAATTCAGAAGCTTTTCATACCAGTGACAGAAGGTGAAATTTGGGATGCTCTAAAAGGCGTAGGGGATGATAACGCTCCAGGACTGGATCGTTTTGGTGCATACTTCTTCAAACAGACCTGGGGTACTATTAGACAGGATATAATGAAAGCAGTGATGTGCTTTTTTTCTACTGGTAAGTTGTTTAAACCAGTTAATTCTGCAGTAGTGACCTTAATTCCTAAGATTAAAAATCCTTCTTTTGTTAAGGATTTTAGCCCTATTGCATGCTGCACCACCCTTTATAAAATCATTTCAAAAGTTATTATGGGGAGAATGCAAGGAGTATTGGAGGACGTTATTGGAGTTGGGCAGTCAGCTTTTATCAAGGGGAGAATGATTACTGATAATATTATCTTGTGCTATGAATTAGTAAAATGCTATAACAGGAAAAATATCTCACCTAGATGCACTATTACGGTGGATTTACAAAAGGCTAATGATTCAGTTGAATGGCCATTTTTGAAGTTTGCATTGATTGAACTGGGTTTCCCTGAACAATTTATCCTTTGGATTATGAGTTGTGTAACTACTGTTAGTTACAGTTTTCTGGTGAATGGATGTCTTTCTAAACCTATGGAGGCCAAAAAGGGTTTGAGACTGGGAGATCCCCTTTCTCCCTATCTCTTTGTGATTTGTATGGAGTATTTAAACAGATGCCTCAAGGAACTTGGAGAAATACCTGATTTAAACTATCATCCAAGGTGCTTAAAACTGGGTATTACTCATCTGTGTTTTGCAGATGATCTGATGTTATTGTGCAAAGGAGATATTGGTTCTGTCCAGCTGCTCCATGAAGCATTTTGTAAATTCACAATAGCATCTGGTCTGAAAGCTAATCTCAACAAGAGCTCTATCTATTTTGGGGGTGTCAAGGTTGAGATCAAGGAGCAAATTCTTGCTTATTTGGGATATACTGAGGGCAAGCTACCCTTTAGATATCTCGGGGTTCCCCTTTCTACAAAAAAACTCACAGTGACTGAATGCCTTCCTTCGGTGGAGAAAATTGTGGAGAGAATTGGATCATGGACAGCAAGGCTAATCTCTTATGCTGGCAGAAAGCAGCTTATTCAGGCTGTTATTTTTGGTATTCAATCATATTGGACTCAAATTTTTATCCTGCCTAAAAAGATCATTAACATGGTTGATGCAGTGTGTAGGAACTATTTGTGGACTGGGAAGACAAGAATGACTAAACGGAACCTTATTGCATGGGAAAGAGTTCGCACTCCAGTTACTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_205859.p1 GENE.R_Transcript_205859~~R_Transcript_205859.p1 ORF type:complete len:463 (+),score=60.99,RVT_1|PF00078.23|3.4e-41 R_Transcript_205859:2397-3785(+)
MEILGFYGKLMGTAATELPMIDRLTIRKGPALNLDQIQKLFIPVTEGEIWDALKGVGDDNAPGLDRFGAYFFKQTWGTIRQDIMKAVMCFFSTGKLFKPVNSAVVTLIPKIKNPSFVKDFSPIACCTTLYKIISKVIMGRMQGVLEDVIGVGQSAFIKGRMITDNIILCYELVKCYNRKNISPRCTITVDLQKANDSVEWPFLKFALIELGFPEQFILWIMSCVTTVSYSFLVNGCLSKPMEAKKGLRLGDPLSPYLFVICMEYLNRCLKELGEIPDLNYHPRCLKLGITHLCFADDLMLLCKGDIGSVQLLHEAFCKFTIASGLKANLNKSSIYFGGVKVEIKEQILAYLGYTEGKLPFRYLGVPLSTKKLTVTECLPSVEKIVERIGSWTARLISYAGRKQLIQAVIFGIQSYWTQIFILPKKIINMVDAVCRNYLWTGKTRMTKRNLIAWERVRTPVTA*

Click here to download the sequence:
Link to NCBI Protein BLAST