Transcript Information: R_Transcript_206202.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value5E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45834613918792
Replicate 20.34115111459273
Replicate 30.43986349889214
Condition 2: 8 Hour
Replicate 10.65102742843488
Replicate 20.75967545398415
Replicate 31.0724733010568
Condition 3: 24 Hour
Replicate 10.50866633443953
Replicate 20.26062344331554
Replicate 30.93758262322012


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_206202.p1 GENE.R_Transcript_206202~~R_Transcript_206202.p1 ORF type:complete len:677 (+),score=119.77,Frigida|PF07899.7|5e+03,Frigida|PF07899.7|3.1e-72 R_Transcript_206202:299-2329(+)
ATGACAGCTACTTCATCACTCACAAGCGAATCCTCATTATCATCATCATCAATGGCGGAAAACTTGAACATCGCAACAGTGAAGCGAGAAAACATTCGTGAAACCCTAGAATTGATCCATACACAATCAAGCACAGGTCTACTACTCGGTCTTCAATGGAAGGACCTAGAAGACCATTTCGACTCAATCTTCACCGCCATAAACAAGCAATTGGAAGAAATTGACCTGAAAACGTACCAAATCGAGTGGAAACACAAATACCTAAAAAATAAGTCGAACGAAATCGCGGTTAAGGAAAATGAGGTGAGAGAGAGCTTGAAAATGGCTGATGATCGGTGTAAGGAAATCGATGCTACGTACGAACTGGTAAGCAGATGTTACGGAGTTGTAAGAGAGAGAAAGGAGAAATACGATCATGAGTTGAAGAAGTTTAAGCGAAAATATGAGAAGTTGAGAGAGTATGAGGGTCATTTGAGGAGGAAATTCGAGAAAAAGGAGTTGAAATTGGACTCTAGAGAGAAGAAGTTAAGGTTTATTGAGAGGAAATTGTTGGAAAGGGTTCAGGAGGTTGAGGAGGGAGAGAGAGCGCTTTTGAGGAGAGAGAAATTGTTTGAGATTAAAAAAGAGCCACTGTATGATGATGATTATGATAATGATTGTGATAATGATCCAACATATGCTGATCTTAGGTTAAATGTGACAATGGATGGTAGGGCATTGCAAGTGTTCTTAAATGGGAGATTTAATGATCATGAAATTCTAAGAGATGAGATTCTTGTTGGACTAGGATTGTCGCGTGACCCTGCAAAATTGGTGTTAGATGCAATGCAAGGGTTTTACCCTGATCATGATGTGGGTTTTGATCATTTGAAGGTTGTTAGGAAGAGTTGTGTGTTGTTGTTGGAGCAGTTGGCTAAGATGAAACCACGACTTAGGGCTCGTGTGAGGGAGAGGGCAATGAATGTAGCAATGGAATGGAAAGGGAGGATGAAGCTTAGTGATCTTGATGAGGGTCATTGTTTGGAGGTTGTTGGGTTCTTGCAGCTTGTAGCTTCTTATGGGTTGGTTAGTGAGTTTAATAAGGATGAGCTAATGGGGCTTTTCGAGAGTTGTGCCCAGCAAGATCGAGCCCCTGAGTTGTGTCGTAGTCTTGGTTTCGGAGATGAAATTCATGATATTATCCAGAATCTTATTCTGAGACACCAGCGAATTGAGGCTGTGAGGCTTGTGTATGCATTTGAATTAGTTGATATATTTCCTCCTGTACCCATTCTGAAGGCGCACTTGAGTAAAATTTTCACTGATGCTGAGAAAACATACAAGAATGGAGACCCTATAGTTGAGGCACAGATCAAGTGTATAAGTATGAAGCTAGCAGCGCTGATCTCTGTTGTCAACTGTATCAAGGAGTATGGTATTGAGTCTAAATACCCAGTTCGACCTCTTGAGAAGCTAATCTCCGAGCTCAAAAGGCAGAGAAGGAAATGTAGCCTCTCAGCCCCTACATGCAAGTCCCAACTGAAAATACAGAATGAAGAACTTTGCTTTTACTTGAACCCCATCTCACCAGACTCACCCTTAGTCGAACATACCACCTCGTTGACCCTTAAGGACCACGAGTTAGCTCTTGGTACTTTTACTGCCACGCAGAAGTGCATCAAGTCAACCCTTGGTCTTAAATCAAGCCCTATCTCCTCCACAAACTCTGAACCCTGTGACATTGGCAGTAATCTCTGCCCTAACACCCTCTCCAATGACTCTTACACAACCGATCTTGCATATTCTACCAGCCACAAAAACTCTTATACATCTCAGACAGGTTTTTCCAGCCTGAATGTCCAGCCACAAAGCTCTACTGGCAACAACAGGCCTCGTTCGGTTTCTGAGTTGGTTAGCAATTCAGGTAGTCCAAGCGCAGCACTTTTAAACCCACAACCGCCTTTATGCGCTTATCGTCCTGTCGACTACTTGCAAGCTACTTCAGCAAGGGGGAGTTATGGTGACTATGTTGTGCGTCCATATTGCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_206202.p1 GENE.R_Transcript_206202~~R_Transcript_206202.p1 ORF type:complete len:677 (+),score=119.77,Frigida|PF07899.7|5e+03,Frigida|PF07899.7|3.1e-72 R_Transcript_206202:299-2329(+)
MTATSSLTSESSLSSSSMAENLNIATVKRENIRETLELIHTQSSTGLLLGLQWKDLEDHFDSIFTAINKQLEEIDLKTYQIEWKHKYLKNKSNEIAVKENEVRESLKMADDRCKEIDATYELVSRCYGVVRERKEKYDHELKKFKRKYEKLREYEGHLRRKFEKKELKLDSREKKLRFIERKLLERVQEVEEGERALLRREKLFEIKKEPLYDDDYDNDCDNDPTYADLRLNVTMDGRALQVFLNGRFNDHEILRDEILVGLGLSRDPAKLVLDAMQGFYPDHDVGFDHLKVVRKSCVLLLEQLAKMKPRLRARVRERAMNVAMEWKGRMKLSDLDEGHCLEVVGFLQLVASYGLVSEFNKDELMGLFESCAQQDRAPELCRSLGFGDEIHDIIQNLILRHQRIEAVRLVYAFELVDIFPPVPILKAHLSKIFTDAEKTYKNGDPIVEAQIKCISMKLAALISVVNCIKEYGIESKYPVRPLEKLISELKRQRRKCSLSAPTCKSQLKIQNEELCFYLNPISPDSPLVEHTTSLTLKDHELALGTFTATQKCIKSTLGLKSSPISSTNSEPCDIGSNLCPNTLSNDSYTTDLAYSTSHKNSYTSQTGFSSLNVQPQSSTGNNRPRSVSELVSNSGSPSAALLNPQPPLCAYRPVDYLQATSARGSYGDYVVRPYCL*

Click here to download the sequence:
Link to NCBI Protein BLAST