Transcript Information: R_Transcript_206399.p1


Annotated TAIR IDAT4G37170.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:17498580-17500655 | Reverse length=691
E-Value1E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59198792285574
Replicate 20.11349351576377
Replicate 30.37146060966734
Condition 2: 8 Hour
Replicate 10.26471205348373
Replicate 20.24173926314795
Replicate 30.29435044249276
Condition 3: 24 Hour
Replicate 10.9927700422791
Replicate 20.83452330937319
Replicate 31.6563668411706


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_206399.p1 GENE.R_Transcript_206399~~R_Transcript_206399.p1 ORF type:3prime_partial len:185 (+),score=27.21,PPR|PF01535.16|0.018,PPR|PF01535.16|39,PPR|PF01535.16|17,PPR|PF01535.16|0.00069,PPR|PF01535.16|0.0016,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|10,PPR_1|PF12854.3|31,PPR_1|PF12854.3|0.0038,PPR_1|PF12854.3|0.0088,PPR_2|PF13041.2|0.00099,PPR_2|PF13041.2|0.00096,PPR_2|PF13041.2|0.024,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|42,PPR_3|PF13812.2|0.0026,PPR_3|PF13812.2|5.6 R_Transcript_206399:69-620(+)
ATGTTGAGAGCTACTCGTTTGCTAATCCACCATTTACTGGAATTCTCTCTCCTCATCGACAACCACCCTCAAACACGGCTCTTTTCTTCTTCACTATCAACCCATTTACAAACCCACCAGCCATATCTGAGTAAAGCTTCCTTCAAACCCAAACCCAAACCCAAACCCAACAACAATGACAGCCTTATCAACCATTTATGCAAAGAAGGAAGATTTAAAGAAGCCATTGACATGTTATGCCACCAAAAGCGACTTAAAGAAGCTCTTCTTTTGCTATACAACCACGTTGATCGTCCCTCTGCTTCTACATATACTTCCCTTTTAAACTCTTGCCTTGAGCAACGAGCCCTTGTTGAGGGTAAAAGGGTTCATGCCCATCTCAAAGATGTTAATTTTATACCTGGGGTTTTCATATCCAATCGTATTATTGATATGTATGTGAGTTGTGGGAGTTTGGATGATGCCCGGAAGGTGTTTGATGAAATGCCTCAAACGGATTTGTGTTCTTGGAATACCATGATTAAAGGTTATGCTAAAGTGGGCAAGGTGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_206399.p1 GENE.R_Transcript_206399~~R_Transcript_206399.p1 ORF type:3prime_partial len:185 (+),score=27.21,PPR|PF01535.16|0.018,PPR|PF01535.16|39,PPR|PF01535.16|17,PPR|PF01535.16|0.00069,PPR|PF01535.16|0.0016,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|10,PPR_1|PF12854.3|31,PPR_1|PF12854.3|0.0038,PPR_1|PF12854.3|0.0088,PPR_2|PF13041.2|0.00099,PPR_2|PF13041.2|0.00096,PPR_2|PF13041.2|0.024,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|42,PPR_3|PF13812.2|0.0026,PPR_3|PF13812.2|5.6 R_Transcript_206399:69-620(+)
MLRATRLLIHHLLEFSLLIDNHPQTRLFSSSLSTHLQTHQPYLSKASFKPKPKPKPNNNDSLINHLCKEGRFKEAIDMLCHQKRLKEALLLLYNHVDRPSASTYTSLLNSCLEQRALVEGKRVHAHLKDVNFIPGVFISNRIIDMYVSCGSLDDARKVFDEMPQTDLCSWNTMIKGYAKVGKVE

Click here to download the sequence:
Link to NCBI Protein BLAST