Transcript Information: R_Transcript_206542.p1


Annotated TAIR IDAT5G62090.1
Annotated Gene NameSEUSS-like 2
Annotated Gene Symbol(s)SLK2
Annotation TypeHomolog
Chromosome Positionchr5:24935221-24938540 | Reverse length=816
E-Value1E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77125187132614
Replicate 20.76887860679401
Replicate 31.161468385157
Condition 2: 8 Hour
Replicate 10.41384560474217
Replicate 21.2597679910527
Replicate 31.1248885454888
Condition 3: 24 Hour
Replicate 10.97004819271989
Replicate 20.4970199186609
Replicate 30.55489955544247


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_206542.p1 GENE.R_Transcript_206542~~R_Transcript_206542.p1 ORF type:complete len:355 (+),score=65.73,LIM_bind|PF01803.12|8.9e-29,LIM_bind|PF01803.12|2.5e+03 R_Transcript_206542:97-1161(+)
ATGATGCTGCATTTCGGAAAAGCAGTCCAAGAGACTGTCTATAAACATTTTCGCACTGTTCATGAAGGACAACTTCGAGTCATTTTCACCCAGGAGCTAAAGATAATATCATGGGAGTTCTGTATACAAAACCATGAGGAGGTCATTTCACGTAGATTGCTGGCATCCCAGATCAATGAACTGGTTGTGGATGCTGCAAAATGTCGAAGTAACATCAATGCAAGAGCAAGCGATGGGGTTCCAGCACAGGATTTGCTGACAAATTGCAATGAATTAGCAACTGCAGGGAATAGACTAGCAAAAAATTTGGAGCTGCCGCTAGTGAATGATTTGGGCTTTTCAAAACAGTTTGTGCGGAGTTTGCAGATATCTGAGATTTTCAATTGCATGAAGGACTTGATGACTTACAGCCAAACCAACAATACAAGTCCAATTGAATCCCTGAAAAGGTATCCTCAAGATTATGCGAATGTGAGATTCAATATGATGAGGCATATGGAGGGGAGGGAGCATATGGCACCAATGCAGAACACTCAAGATCCTCACTGGAGCAATTTGACTAATGCTAATAATCTCCAGATGGCTAACTTAATGTTTCAGACTCCAACTGGAAGGAATTTAACAACTCCTGCAAACTATTACCAACACCATATGTCGTGCGACACAAGCTTTCAACGACAAGTCCCCCAGCAAAGCTCCTACGACAAAGTGTCATCTTGTTTGGTATCAAATCAGGCTCCAGATGATACCCAAATGATACATGAACTGCTGGAGTTCATGCATAGCGAAGAAACCAAAAAGCAAGAGAGCAAAAATGTACGAGGGAAAGCCAAACTTGTTAATGACCCTGATATTCCAGGTGCCCAAAGCATTCCTGGTGGGATGCAGATGAGAGATCTCCAGTCAGCTTGTTTCTGGGGAGGTATGATGGAGGAAGGTGGGGTTGGTCCATCGACGAGGAATCTTCCTGATTGCAACTTCATCAAAACAGAATCAGGTTATGATGAGAATGTTGCCTCACCAGCTCATTGCCAAAAGTTCTTCAATAATGGTCATCCTCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_206542.p1 GENE.R_Transcript_206542~~R_Transcript_206542.p1 ORF type:complete len:355 (+),score=65.73,LIM_bind|PF01803.12|8.9e-29,LIM_bind|PF01803.12|2.5e+03 R_Transcript_206542:97-1161(+)
MMLHFGKAVQETVYKHFRTVHEGQLRVIFTQELKIISWEFCIQNHEEVISRRLLASQINELVVDAAKCRSNINARASDGVPAQDLLTNCNELATAGNRLAKNLELPLVNDLGFSKQFVRSLQISEIFNCMKDLMTYSQTNNTSPIESLKRYPQDYANVRFNMMRHMEGREHMAPMQNTQDPHWSNLTNANNLQMANLMFQTPTGRNLTTPANYYQHHMSCDTSFQRQVPQQSSYDKVSSCLVSNQAPDDTQMIHELLEFMHSEETKKQESKNVRGKAKLVNDPDIPGAQSIPGGMQMRDLQSACFWGGMMEEGGVGPSTRNLPDCNFIKTESGYDENVASPAHCQKFFNNGHPR*

Click here to download the sequence:
Link to NCBI Protein BLAST