Transcript Information: R_Transcript_20728.p1


Annotated TAIR IDAT4G28600.1
Annotated Gene Nameno pollen germination related 2
Annotated Gene Symbol(s)NPGR2
Annotation TypeHomolog
Chromosome Positionchr4:14130046-14132599 | Forward length=739
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5144317699538
Replicate 23.8254733720933
Replicate 35.1611842706213
Condition 2: 8 Hour
Replicate 14.0525979537165
Replicate 25.1314958328173
Replicate 37.6241813732363
Condition 3: 24 Hour
Replicate 15.7793645454999
Replicate 25.0000100127456
Replicate 36.8494207990986


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20728.p1 GENE.R_Transcript_20728~~R_Transcript_20728.p1 ORF type:complete len:719 (+),score=191.94,TPR_2|PF07719.13|1.6e+04,TPR_2|PF07719.13|40,TPR_2|PF07719.13|2.8,TPR_2|PF07719.13|2.2e+03,TPR_2|PF07719.13|52,TPR_2|PF07719.13|2.6,TPR_2|PF07719.13|85,TPR_2|PF07719.13|35,TPR_2|PF07719.13|0.95,TPR_2|PF07719.13|0.0091,TPR_2|PF07719.13|0.062,TPR_16|PF13432.2|2.1,TPR_16|PF13432.2|2.2e+02,TPR_16|PF13432.2|1.6e+04,TPR_16|PF13432.2|18,TPR_16|PF13432.2|2.3,TPR_16|PF13432.2|1.9e+03,TPR_16|PF13432.2|0.00063,TPR_16|PF13432.2|51,TPR_11|PF13414.2|1e+02,TPR_11|PF13414.2|12,TPR_11|PF13414.2|11,TPR_11|PF13414.2|4,TPR_11|PF13414.2|0.42,TPR_11|PF13414.2|2.8e+03,TPR_11|PF13414.2|7.2e-06,TPR_11|PF13414.2|0.0091,TPR_12|PF13424.2|1.8e+02,TPR_12|PF13424.2|33,TPR_12|PF13424.2|0.85,TPR_12|PF13424.2|3.2,TPR_12|PF13424.2|5.6,TPR_12|PF13424.2|0.00042,TPR_12|PF13424.2|11,TPR_1|PF00515.24|2.8e+02,TPR_1|PF00515.24|4.3,TPR_1|PF00515.24|5.4e+02,TPR_1|PF00515.24|9e+02,TPR_1|PF00515.24|7.4e+02,TPR_1|PF00515.24|3.4e+03,TPR_1|PF00515.24|5.6e+02,TPR_1|PF00515.24|5.1,TPR_1|PF00515.24|0.00028,TPR_1|PF00515.24|0.02,TPR_7|PF13176.2|4.2e+02,TPR_7|PF13176.2|70,TPR_7|PF13176.2|1.6e+04,TPR_7|PF13176.2|14,TPR_7|PF13176.2|5.4e+03,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|8.6,TPR_7|PF13176.2|0.055,TPR_7|PF13176.2|0.31,TPR_19|PF14559.2|5.5e+03,TPR_19|PF14559.2|14,TPR_19|PF14559.2|1e+03,TPR_19|PF14559.2|3.8e+02,TPR_19|PF14559.2|0.0041,TPR_19|PF14559.2|22,TPR_19|PF14559.2|0.03,TPR_19|PF14559.2|7e+02,TPR_19|PF14559.2|1.2e+04,TPR_8|PF13181.2|2.2e+03,TPR_8|PF13181.2|15,TPR_8|PF13181.2|12,TPR_8|PF13181.2|1.5e+02,TPR_8|PF13181.2|1.4e+03,TPR_8|PF13181.2|1.6e+03,TPR_8|PF13181.2|4.1e+02,TPR_8|PF13181.2|8.7,TPR_8|PF13181.2|7.4,TPR_8|PF13181.2|0.54,TPR_14|PF13428.2|4,TPR_14|PF13428.2|2.4e+03,TPR_14|PF13428.2|9.7e+03,TPR_14|PF13428.2|4e+02,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|44,TPR_14|PF13428.2|7.9e+02,TPR_14|PF13428.2|12,TPR_14|PF13428.2|0.94,TPR_14|PF13428.2|1.5e+02 R_Transcript_20728:257-2413(+)
ATGAGGAATAGGAGGAAAGTAGCAAAAGAAGTGCTGGAAAAGGGTAGTGCTAATTTGAAGTTTCGGAGTATAATGCAGTGCCTCTGCTCTCGAGAGCAGATGAGAATAAATGAGTTGTTGCCATTGCCTGATTCATCCGGTGAGGTACAGAACAGGCTTGACACTGGAAATGTCGAAGAAGCTGAATCATCTCTTTTTGGAACTGGTCCTCTAAATTACGAGGAAGCAAGAGCATTGTTGGGAAGATATGAGTTTCAGAAAGGGAATATAGAAGCTGCTTTGCAAGTCTTTGAAGGGATTGATGTTACTTCAGTAACTCCCAAGATCAAACAGGCACTTGCTGCCAGAATAGGTGATGGTCGTGGAAGGCATTCTCAAAGTGATCCCAGTACATATATGTCAATGCGTGCTGTGAGTCTGATCTTTGAGGCCATGTTCCTGAAAGCAAAGTCGCTGCAGTCTCTTGGCAAGTTTAAAGAAGCTGCTCAATCATGCAAAGTTGTTCTGGACATTGTTGAATCTTCATTACCAGATGGCTTGCCTGGAAACTTTGGTGCTGACTCTAAATTGCAGGAGACAGTAACTAGTGCTGTGGGGCTGCTTCCAGAATTGTGGAAGCTTGCTGATTGTCCAAATGATGCAATTTTGTCATACCGGCGGGCCCTTCTTCATCTTTGGACCCTTGATGCTGAAACTGCTACTAGGTTACAAAAGGAATTTGCTATTTTTCTATTGTATAGTGGCTGTGAAGCAAGCCCTCCAAACTTGCGTTCACAAATTGATACCTCATTTGTACCTAAAAGCAATTTGGAAGAGGCTATCCTGCTGCTGATGCTTTTGTTGGGTAAAGTAACCGGTGGAGCAGCCAAGTGGGATCCCTCAGTCGTGGATCATTTATCATATGCTCTAGCAGTCTCAAACCAACCCTATTCCTTAGCCTCTATTATAGAAGCATTGCCTCCGGGGATTATTGAAAGAAAGAAAATGTATCATATTTTGGCTCTATGTTATCAAGCAGTTGGTGATAACCTTGCTGCTTTGAATCTTCTCAGGAAGCTATTGCATCATACAGAGGATCCTAATCATATTCCTGGTTTACTAATGGCTTCAAAGATATGTGGTGAAATCACCGTTTTGGCTGAAGAAGGGAGCACATATGCTCGAAGAGCTCTAGGGGTCAAGGAGGATGAATGTCCTCATTCAGTTGGTCTTACTAATTTATTACTGGGTGTATCACTTTCAGAATTTGCTAAATCAGCAATTGCTGATTCTGATAGGGTCAAAAGGCAGTCAGATGCAGTTCAGGCACTTGAATATGCTGGGAAGTTGACAAATATGGGGGACCCTAAAGTTCTGTATCATCTAAGTCTAGAGTGTGCTGAACAGAGAAAGCTGGATACTGCACTATATTATGCTGAGCAATTGTTGACATTGGAAAGTGGAAGTAATATTAAAGGATGGTTATTGTTGGCACGGATATTATCTGGAAAAAAGTGCTTTGCTGATGCAGAAACAGTTATAAATGCTGCTCTTGATCAAACTGGAGAGTGGGATCAGGGAGTGCTCTGGAGAACAAAGGCTAAACTGCAAATTGCACAGGGTCATTTGAAAAAAGCCATGGAAACATATGTTCAGCTTCTTGGAGTTTTGAAAGTTTGTAAGAAATTTGGAACTGGGAAGAAACTCGATAAGAGTTTTGAAAACCATGAGCGGCAGTTGGAACTGCAGATATGGGATGATCTTGCTCATATATACATCAAGTTGTCACGGTGGAATGATGCTGAGAGATGTCTATCTGAATCCAAGGCTACCAGTCCTAATTCTTCTTCCAGATGGCAAGCCATAGGTTCATTACATGAAGCGAAAGGCCTTTACAAAGAGGCTCTTGATGCTTACACTATGGCTTTGGTTATTGACCCTACGTATGTCCCAAGCTTGATATCCTCAGCTATGGTACTCAAACGGCTCAATGGTAAGGGCAATGCAGTTGTTGGAAGCTATCTGATGAATGCACTCAAGTTTGACCGGTTAAATCATGGTGCTTGGTATAGCCTGGGCCTGCTCTACAAAGAAGATTCACGCTTCTCTGAGGCTGCAGAATGCTTTGAAGTTGCAGCTTTTCTCAAAGAGACTGCTCCTGTGGAACCATTTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20728.p1 GENE.R_Transcript_20728~~R_Transcript_20728.p1 ORF type:complete len:719 (+),score=191.94,TPR_2|PF07719.13|1.6e+04,TPR_2|PF07719.13|40,TPR_2|PF07719.13|2.8,TPR_2|PF07719.13|2.2e+03,TPR_2|PF07719.13|52,TPR_2|PF07719.13|2.6,TPR_2|PF07719.13|85,TPR_2|PF07719.13|35,TPR_2|PF07719.13|0.95,TPR_2|PF07719.13|0.0091,TPR_2|PF07719.13|0.062,TPR_16|PF13432.2|2.1,TPR_16|PF13432.2|2.2e+02,TPR_16|PF13432.2|1.6e+04,TPR_16|PF13432.2|18,TPR_16|PF13432.2|2.3,TPR_16|PF13432.2|1.9e+03,TPR_16|PF13432.2|0.00063,TPR_16|PF13432.2|51,TPR_11|PF13414.2|1e+02,TPR_11|PF13414.2|12,TPR_11|PF13414.2|11,TPR_11|PF13414.2|4,TPR_11|PF13414.2|0.42,TPR_11|PF13414.2|2.8e+03,TPR_11|PF13414.2|7.2e-06,TPR_11|PF13414.2|0.0091,TPR_12|PF13424.2|1.8e+02,TPR_12|PF13424.2|33,TPR_12|PF13424.2|0.85,TPR_12|PF13424.2|3.2,TPR_12|PF13424.2|5.6,TPR_12|PF13424.2|0.00042,TPR_12|PF13424.2|11,TPR_1|PF00515.24|2.8e+02,TPR_1|PF00515.24|4.3,TPR_1|PF00515.24|5.4e+02,TPR_1|PF00515.24|9e+02,TPR_1|PF00515.24|7.4e+02,TPR_1|PF00515.24|3.4e+03,TPR_1|PF00515.24|5.6e+02,TPR_1|PF00515.24|5.1,TPR_1|PF00515.24|0.00028,TPR_1|PF00515.24|0.02,TPR_7|PF13176.2|4.2e+02,TPR_7|PF13176.2|70,TPR_7|PF13176.2|1.6e+04,TPR_7|PF13176.2|14,TPR_7|PF13176.2|5.4e+03,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|8.6,TPR_7|PF13176.2|0.055,TPR_7|PF13176.2|0.31,TPR_19|PF14559.2|5.5e+03,TPR_19|PF14559.2|14,TPR_19|PF14559.2|1e+03,TPR_19|PF14559.2|3.8e+02,TPR_19|PF14559.2|0.0041,TPR_19|PF14559.2|22,TPR_19|PF14559.2|0.03,TPR_19|PF14559.2|7e+02,TPR_19|PF14559.2|1.2e+04,TPR_8|PF13181.2|2.2e+03,TPR_8|PF13181.2|15,TPR_8|PF13181.2|12,TPR_8|PF13181.2|1.5e+02,TPR_8|PF13181.2|1.4e+03,TPR_8|PF13181.2|1.6e+03,TPR_8|PF13181.2|4.1e+02,TPR_8|PF13181.2|8.7,TPR_8|PF13181.2|7.4,TPR_8|PF13181.2|0.54,TPR_14|PF13428.2|4,TPR_14|PF13428.2|2.4e+03,TPR_14|PF13428.2|9.7e+03,TPR_14|PF13428.2|4e+02,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|44,TPR_14|PF13428.2|7.9e+02,TPR_14|PF13428.2|12,TPR_14|PF13428.2|0.94,TPR_14|PF13428.2|1.5e+02 R_Transcript_20728:257-2413(+)
MRNRRKVAKEVLEKGSANLKFRSIMQCLCSREQMRINELLPLPDSSGEVQNRLDTGNVEEAESSLFGTGPLNYEEARALLGRYEFQKGNIEAALQVFEGIDVTSVTPKIKQALAARIGDGRGRHSQSDPSTYMSMRAVSLIFEAMFLKAKSLQSLGKFKEAAQSCKVVLDIVESSLPDGLPGNFGADSKLQETVTSAVGLLPELWKLADCPNDAILSYRRALLHLWTLDAETATRLQKEFAIFLLYSGCEASPPNLRSQIDTSFVPKSNLEEAILLLMLLLGKVTGGAAKWDPSVVDHLSYALAVSNQPYSLASIIEALPPGIIERKKMYHILALCYQAVGDNLAALNLLRKLLHHTEDPNHIPGLLMASKICGEITVLAEEGSTYARRALGVKEDECPHSVGLTNLLLGVSLSEFAKSAIADSDRVKRQSDAVQALEYAGKLTNMGDPKVLYHLSLECAEQRKLDTALYYAEQLLTLESGSNIKGWLLLARILSGKKCFADAETVINAALDQTGEWDQGVLWRTKAKLQIAQGHLKKAMETYVQLLGVLKVCKKFGTGKKLDKSFENHERQLELQIWDDLAHIYIKLSRWNDAERCLSESKATSPNSSSRWQAIGSLHEAKGLYKEALDAYTMALVIDPTYVPSLISSAMVLKRLNGKGNAVVGSYLMNALKFDRLNHGAWYSLGLLYKEDSRFSEAAECFEVAAFLKETAPVEPFR*

Click here to download the sequence:
Link to NCBI Protein BLAST