Transcript Information: R_Transcript_207622.p1


Annotated TAIR IDAT5G50115.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT5G50510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20379489-20381036 | Forward length=485
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22534519697184
Replicate 20.51842717077279
Replicate 30.56559845916426
Condition 2: 8 Hour
Replicate 11.81376777387
Replicate 20.55212053928853
Replicate 32.0168456244874
Condition 3: 24 Hour
Replicate 11.1337188754422
Replicate 20.81686144039175
Replicate 32.1617486110516


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_207622.p1 GENE.R_Transcript_207622~~R_Transcript_207622.p1 ORF type:internal len:81 (+),score=16.90,DUF3444|PF11926.4|7.4e-10 R_Transcript_207622:2-241(+)
GACAAATGGAGGACCAAGGCTGAGATAAATGATGACACACATGATCTGGATTCTAGGTCAGTAGGTACTGGCCAGCAAGTTGAGAATAAGTCCTTGCATAGTCCCACATTAATGTCTACAGCTAATGAGGTCTTGGACCAAAATTCTATCTCTGTTCCTGATCCAGATTTTCATAATTTTGACAAGCATAGGACTGAAAAGTCCTTTGGAGAAAATCAGGTATGGGCTGTGTACGACAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_207622.p1 GENE.R_Transcript_207622~~R_Transcript_207622.p1 ORF type:internal len:81 (+),score=16.90,DUF3444|PF11926.4|7.4e-10 R_Transcript_207622:2-241(+)
DKWRTKAEINDDTHDLDSRSVGTGQQVENKSLHSPTLMSTANEVLDQNSISVPDPDFHNFDKHRTEKSFGENQVWAVYDN

Click here to download the sequence:
Link to NCBI Protein BLAST