Transcript Information: R_Transcript_20845.p1


Annotated TAIR IDAT2G41900.1
Annotated Gene NameCCCH-type zinc finger protein with ARM repeat domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17491352-17493502 | Forward length=716
E-Value7.9e-313
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.617816398852
Replicate 224.936866826807
Replicate 329.699996453464
Condition 2: 8 Hour
Replicate 124.345544804281
Replicate 227.102157647053
Replicate 333.000564294085
Condition 3: 24 Hour
Replicate 134.634055889359
Replicate 227.174101211886
Replicate 337.064852349445


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20845.p1 GENE.R_Transcript_20845~~R_Transcript_20845.p1 ORF type:complete len:698 (+),score=144.30,Ank_4|PF13637.2|6.8e-08,Ank_4|PF13637.2|0.015,Ank_2|PF12796.3|2.4e-12,Ank_5|PF13857.2|1e+04,Ank_5|PF13857.2|0.0041,Ank_5|PF13857.2|3.5e-05,Ank|PF00023.26|0.23,Ank|PF00023.26|9.7e-06,Ank_3|PF13606.2|0.0057,Ank_3|PF13606.2|0.0085 R_Transcript_20845:258-2351(+)
ATGAATCACTTGACTGTTGAGACAGGTGATGTTTTTTCGAGTTTACTTGAACTTGCTGCGAATAATGATGTCGAGGGATTTAAACGATTGATTGAGGATGATCCCTCTGGAATTGACGAGGTTGGGTTGTGGTATGTGCGGAAAAAAGGATCGAAGCAGATGGTTAATGAGAAAAGAACTCCTTTGATGGTTGCTGCCATGTATGGAAGCATTGATGTTGTGAGGTTGATTCTTTCTCTCTCAATTACTGATGTAAACCGATCTTGTGGAAATGATAAAAGCACTGCCCTTCACTGTGCTGCATCTGGTGGTTCTGTGAATGCGGTTGATGCTGTCAAGTTGCTTCTAGAAGCAGGAGCTGACCCGAATGCTGTTGATGCCAATGGGCATCGGCCTTTTGATGTTATTATAGTCTCACTGAAACAAAATGATATGAGATCTGCTCTAGAAGAGCTCCTTGCAGGTCATGGTTCTGTTACTGAGCGCATTTTAAGGGTGTCGACAACCACTTCAAATTCCAACTCTCCACCACTCTCATCCTCACCAGGTAATGGATTCTCTTCATCTTCCTCTGAGTCGCCACCTTCTCCAATGAACATGAAGTTTGATGATCAGCAGCCCATAACTTACGGGTCAGAGAAGAAAGAATACCCGATTGATCCATCTTTGCCTGATATCAAGAACAGCATATATGCTACAGATGAGTTCCGCATGTACTCCTTTAAGATCCGGCCTTGTTCTCGTGCCTATTCCCATGATTGGACGGAATGTCCATTTGTTCATCCAGGTGAAAATGCTCGAAGAAGAGATCCTAGAAAATACCACTACAGCTGCGTTCCTTGTCCTGATTTCAGGAAAGGGGCCTGTAGGAGAGGGGATATGTGTGAATATGCCCATGGGGTATTTGAGTGTTGGCTCCATCCTGCTCAATATCGTACACGCCTTTGCAAAGACGGCACAAGTTGCACAAGAAGAGTTTGTTTCTTTGCTCATACACCCGAGGAGCTAAGACCTCTGTACGTATCTACTGGTTCTGCTGTTCCCTCACCCCGCTCAAGCACTTCAAGTTCTATGGATTTTGCTGCTGCTATGAACTTCATGCCTGGATCTCCGTCATCACTAATGTCTCCATCAGCTTTCACTCCGCCAATGTCACCATCAGCTGCTAACGGCATGTCTCACTCGTCCTTGGCTTGGCCTCAGCCGGATGTCCCATCATTGCGTCTCCCAGGTAGCAATCTTCAGTCTAGTAGGCTGAGATCGTCCCTTAATGCAAGAGATATTGCAGCGGAAGAGCTTGATATGTTGCAGGATTACGATGTGCAACAACAACAGCAGCTCCTGAATGATTTTTCTTGCCTCTCTATGAGCCCCAACCCCTTGAGCCGTTCTAACCGTTCCAAAACTCTAAACCCTTCTAACCTTGATGATTTGTTTTCGGCTGAAAGCTCATCTCCTCGGTACAATGACCAATCACTGGCCGCCTCGGTTTACTCTCCTACTCATAAATCAGCTGTCTTCAACCAATTTCAACAGCAACAACAGGGCATGCTGTCTCCAATCAACACAAGTTTCTCCCCGAAAGGCGTGGACCATCCATTGTTATCCGGTAGAATGTCTCCTAGAGGTGTGGACCCCATTTCACCAATGAGTGCTCGGGCTTCCATGATTGCTCAACGAGAACAGCAGCTACATCAGTTCCGTAGTCTCAGCTCTCGGGATCTTGGCTCCAACTTGGGTTCCATTGTGGGCTCGCCCTCCCATTCTTGGTCAAGATGGGGATCCTCCAATGGAAAACCAGATTGGGCTGTCAACCCTGAGGAGTTGGGTAAACTGAGGAGATCATCGTCTTTTGAGCTTGGAACCAATGGTGAAGAGCCTGATTTATCGTGGGTTCAGTCACTCGTCAAAGAATCACCCACCGACATGAAAGAGAAAGCAGCAATATCCACCTCAACCGCGAGTAGTGAGGGTTCTCACCTGAACTCGCAAACTGAAGCAGGCGATCACTCAGTTATCGGTGGCTGGATCGAGCAAATGCAACTTGACCAGGCTGTGGCTCGTTCAACTGACGGTTCCTTTTCTGGTCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20845.p1 GENE.R_Transcript_20845~~R_Transcript_20845.p1 ORF type:complete len:698 (+),score=144.30,Ank_4|PF13637.2|6.8e-08,Ank_4|PF13637.2|0.015,Ank_2|PF12796.3|2.4e-12,Ank_5|PF13857.2|1e+04,Ank_5|PF13857.2|0.0041,Ank_5|PF13857.2|3.5e-05,Ank|PF00023.26|0.23,Ank|PF00023.26|9.7e-06,Ank_3|PF13606.2|0.0057,Ank_3|PF13606.2|0.0085 R_Transcript_20845:258-2351(+)
MNHLTVETGDVFSSLLELAANNDVEGFKRLIEDDPSGIDEVGLWYVRKKGSKQMVNEKRTPLMVAAMYGSIDVVRLILSLSITDVNRSCGNDKSTALHCAASGGSVNAVDAVKLLLEAGADPNAVDANGHRPFDVIIVSLKQNDMRSALEELLAGHGSVTERILRVSTTTSNSNSPPLSSSPGNGFSSSSSESPPSPMNMKFDDQQPITYGSEKKEYPIDPSLPDIKNSIYATDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCTRRVCFFAHTPEELRPLYVSTGSAVPSPRSSTSSSMDFAAAMNFMPGSPSSLMSPSAFTPPMSPSAANGMSHSSLAWPQPDVPSLRLPGSNLQSSRLRSSLNARDIAAEELDMLQDYDVQQQQQLLNDFSCLSMSPNPLSRSNRSKTLNPSNLDDLFSAESSSPRYNDQSLAASVYSPTHKSAVFNQFQQQQQGMLSPINTSFSPKGVDHPLLSGRMSPRGVDPISPMSARASMIAQREQQLHQFRSLSSRDLGSNLGSIVGSPSHSWSRWGSSNGKPDWAVNPEELGKLRRSSSFELGTNGEEPDLSWVQSLVKESPTDMKEKAAISTSTASSEGSHLNSQTEAGDHSVIGGWIEQMQLDQAVARSTDGSFSGH*

Click here to download the sequence:
Link to NCBI Protein BLAST