Transcript Information: R_Transcript_20850.p1


Annotated TAIR IDAT2G39220.1
Annotated Gene NamePATATIN-like protein 6
Annotated Gene Symbol(s)PLP6, PLA IIB
Annotation TypeOrtholog
Chromosome Positionchr2:16375055-16376663 | Reverse length=499
E-Value3.9E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.504503607286
Replicate 215.270036666399
Replicate 319.468305525694
Condition 2: 8 Hour
Replicate 111.958213113771
Replicate 213.75690616445
Replicate 319.955259032984
Condition 3: 24 Hour
Replicate 119.608782494699
Replicate 213.802022476979
Replicate 322.489269509159


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20850.p1 GENE.R_Transcript_20850~~R_Transcript_20850.p1 ORF type:complete len:473 (+),score=43.28,Patatin|PF01734.18|4.3e-19 R_Transcript_20850:590-2008(+)
ATGGCGACGGCGTGTAGTCCGTCATCAGAAATGCAAGAACCAAGTATAGACACAGACAAGCTAAGCTACGAGATATTTTCAATACTGGAGAGCAAATTTTTATTCGGCTATGGTGACACCCAAAACAACAGTAACAGTAAACTAAGCTGGATTCCGAAACAAATATCTCCAACGGTTGAATTCTCACCGGAAGAACTGGCTACTACGGTTCCTCCCAGCTCGATCAAGAACCAGAGAGGGAAGATATGTATTCTGAGTATCGATGGTGGAGGAATGAGGAATATCATCTCTGGTAAGGCTTTGGCTTACTTGGAGCAGGCGTTGAAAGTCAAGTCCGGTAATCCTGACGCCGGAATCGCTGATTACTTTGATGTAGCTGCCGGAGCCGGCGTCGGAGGGGTTTTCACGGCGATGTTGTTTGCCACGAAGGATCAGAGCCGTCCGTTGTACAAGGCGGACGATACGTGGCGGTTTCTGGCTGAGCAGGGGAGTAAGATTTACCGGTCGGGTTCGTCCGGTTCGGTTCTGAAGAGGATATTGAAGAAGAAGGGAGGAGCCAGTGGTGGTGGTGGGTCGACCGGGGCGGCCACGGCTGGGTTGGAGAAGTTGCTGAAAGAGAAGTTTACGAAAAAAACCGGTGGAAGTTTGACTCTCAAAGACACGTTGAAGCCGGTTTTAATTCCGTGCTACGACTTGTCCAGTACGGCACCGTTTCTATTCTCACGCGCTGCCGCGCTCGAGACGGACGGGTTCGATTTCCCGCTCTGGGAAGTTTGTCGTGCCACGTCAGCTGAACCAGGTGTTTTCGAGCCGGTTTGCATGCGGTCCGTTGACGGTTCAACCCGGTGCGTCGCGGTTGACGGTGGTCTAGCGATGGCAAACCCAACAGCTGCGGCTATTACGCACGTGCTCCACAACAAGCAGGAATTCCCGTTCGTGCGAGGGGTGGAGGACATTTTGGTACTTTCAATAGGTACAGGGCAGCTTCTAGAAGGGAGTTATGATCACCAAGAGGTCAAGGGTTGGAAGTCCAAGCAATGGGCTCGTCCAATGGCTCGCATTGCTGGTGATGGCTACACCGATATGGTGGACCACGCCATCGCCATGGCTTTTGGGCAGTGCCGTAGCAGTAACTATGTTCGCATTCAGGCAAATGGGTCAAGCTTTGGACGGTGCGGACCAAATGTTGATACAGATCCAAGTCCTGGTAATGTGAAGATACTGGTAGGAATAGGGGAGGAAATGCTGAAACAAAAAAATGTTGAATCTGTGCTCTTTGGAGGCAAGAGAATCAGTGAGCAGAGCAACTTTGAGAAGCTGGATTGGTTTGCGGAACAGCTTGTATTGGAGCATCAGAGGCGGAGTTGCAGAATAGCTCCCACTGTTGCATTCAAGCAAGCTACCATAAGACCAACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20850.p1 GENE.R_Transcript_20850~~R_Transcript_20850.p1 ORF type:complete len:473 (+),score=43.28,Patatin|PF01734.18|4.3e-19 R_Transcript_20850:590-2008(+)
MATACSPSSEMQEPSIDTDKLSYEIFSILESKFLFGYGDTQNNSNSKLSWIPKQISPTVEFSPEELATTVPPSSIKNQRGKICILSIDGGGMRNIISGKALAYLEQALKVKSGNPDAGIADYFDVAAGAGVGGVFTAMLFATKDQSRPLYKADDTWRFLAEQGSKIYRSGSSGSVLKRILKKKGGASGGGGSTGAATAGLEKLLKEKFTKKTGGSLTLKDTLKPVLIPCYDLSSTAPFLFSRAAALETDGFDFPLWEVCRATSAEPGVFEPVCMRSVDGSTRCVAVDGGLAMANPTAAAITHVLHNKQEFPFVRGVEDILVLSIGTGQLLEGSYDHQEVKGWKSKQWARPMARIAGDGYTDMVDHAIAMAFGQCRSSNYVRIQANGSSFGRCGPNVDTDPSPGNVKILVGIGEEMLKQKNVESVLFGGKRISEQSNFEKLDWFAEQLVLEHQRRSCRIAPTVAFKQATIRPT*

Click here to download the sequence:
Link to NCBI Protein BLAST