Transcript Information: R_Transcript_20857.p1


Annotated TAIR IDAT4G14145.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8152499-8153091 | Reverse length=134
E-Value5E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.50233951386
Replicate 245.76537356365
Replicate 340.265749680737
Condition 2: 8 Hour
Replicate 139.406938899473
Replicate 231.619684478551
Replicate 335.594173950915
Condition 3: 24 Hour
Replicate 148.426624620938
Replicate 237.218249377849
Replicate 338.474480894937


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20857.p1 GENE.R_Transcript_20857~~R_Transcript_20857.p1 ORF type:complete len:128 (+),score=19.69,COX16|PF14138.2|1.3e-20 R_Transcript_20857:334-717(+)
ATGACGGCAATTTCAAAATCAGCAAATGAACAATCGAAGAAAACGACGCCGTTGTCGAGTTTTCAGTATTCAGGTTTGAAGAGATTGGGTCAGAGAAACCCGTTTTTGAGATATGGGCTTCCTCTCATTTCACTTACTGTCATTGGGACTGTTGGCCTTGGTCATCTCTTACAAGGCAGTAAGGATATTGCAAAAGTGAAAGATGATCAAGAGTGGGAGATCATTGAGGAAAGAAAAGCTCTTTCAAGAACCGGACCTGTAAATGCATATAAACCAAAAAAGATTTCGCTTGAGGATGAGCTAAAGACATTGCAAGAGAAAGTAGATATCAACAACTACGAATACAAAAGAATTCCGCGTCCGGGTGAAGTTAAGTCAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20857.p1 GENE.R_Transcript_20857~~R_Transcript_20857.p1 ORF type:complete len:128 (+),score=19.69,COX16|PF14138.2|1.3e-20 R_Transcript_20857:334-717(+)
MTAISKSANEQSKKTTPLSSFQYSGLKRLGQRNPFLRYGLPLISLTVIGTVGLGHLLQGSKDIAKVKDDQEWEIIEERKALSRTGPVNAYKPKKISLEDELKTLQEKVDINNYEYKRIPRPGEVKSS*

Click here to download the sequence:
Link to NCBI Protein BLAST