Transcript Information: R_Transcript_208723.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1388057867279
Replicate 20.079833841887065
Replicate 30.087097861582329
Condition 2: 8 Hour
Replicate 10
Replicate 20.17004472883031
Replicate 30
Condition 3: 24 Hour
Replicate 10.08729204269089
Replicate 20
Replicate 30.083223211737252


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_208723.p1 GENE.R_Transcript_208723~~R_Transcript_208723.p1 ORF type:5prime_partial len:263 (+),score=45.24,rve|PF00665.22|1.7e-11,gag_pre-integrs|PF13976.2|4.1e-07 R_Transcript_208723:1-789(+)
ACTAAGACTCAATGCACATTACAGGGCCTTTCTCTGAAGAGGCCTCAGGCTCTTGGTAATGTACATGGAGGACTATATCTCTTTCACATGCCATCTGACTTAAAGCAACATATTGTTCCAGTTATGTCTCCTGTCTGTACTGAAAATAATTCACCTTCTGTTTGTGATACTGTCAATGTAGTTCCCTCTGTACCTGCTGTTACATCTTGTAATTCTTGTACTGAGAAGTTTGTTCATGACAATAATACAATGCTTGTTCATAATTCTGCCTGTCATGTTGATTCTGATGTACACTGTAATGCTTCTATGAAGGATACTTTTATTCTTTGGCATAACAGACTTGGTCACCTACCTTATTACAAACTTAAAACTCTTCCTTTTCTTCATGGTTCCTTTGATTCCTCTCTTCTTCCTTGTGATATTTGTCCTAAAGCCAGACAGCACCATTTGCCTTTTCCTTCAAGCTCAATTAAAACATCTTCCCCTTTTGATCTTATTCACATCGATTTGTGGGGACCTTATCATGCCAAGACTTATAATGGATACTCTTACTTTCTTACTATTGTTGATGATTTTACAAGAAACACTTGGACTCATTTACTTCAAACAAAGAGCAATGCATGGGGTCTTATTGTTGCTTTTATCCAGTTAATTGCTACTCAATTCAATGCTACTATCAAAGTCATAAGATCAGATAATGCTTTAGAACTTGGCTCAAGCAAGGCTGCTATCCAATTTTTCAAGGATAAAGGGATTTTACACCAAACCAGTCTTAGAGCTACTCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_208723.p1 GENE.R_Transcript_208723~~R_Transcript_208723.p1 ORF type:5prime_partial len:263 (+),score=45.24,rve|PF00665.22|1.7e-11,gag_pre-integrs|PF13976.2|4.1e-07 R_Transcript_208723:1-789(+)
TKTQCTLQGLSLKRPQALGNVHGGLYLFHMPSDLKQHIVPVMSPVCTENNSPSVCDTVNVVPSVPAVTSCNSCTEKFVHDNNTMLVHNSACHVDSDVHCNASMKDTFILWHNRLGHLPYYKLKTLPFLHGSFDSSLLPCDICPKARQHHLPFPSSSIKTSSPFDLIHIDLWGPYHAKTYNGYSYFLTIVDDFTRNTWTHLLQTKSNAWGLIVAFIQLIATQFNATIKVIRSDNALELGSSKAAIQFFKDKGILHQTSLRATP*

Click here to download the sequence:
Link to NCBI Protein BLAST