Transcript Information: R_Transcript_20984.p1


Annotated TAIR IDAT1G15780.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5430446-5435921 | Reverse length=1335
E-Value2E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6356726234206
Replicate 21.4441899757242
Replicate 32.2421938916869
Condition 2: 8 Hour
Replicate 12.720651660805
Replicate 22.7803212871315
Replicate 34.4178523203058
Condition 3: 24 Hour
Replicate 15.1017349394898
Replicate 23.5591819902784
Replicate 34.6902224329066


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20984.p1 GENE.R_Transcript_20984~~R_Transcript_20984.p1 ORF type:3prime_partial len:378 (+),score=110.56,KIX_2|PF16987.1|3.2e-22,KIX_2|PF16987.1|1.6e+04,KIX_2|PF16987.1|1.6e+04 R_Transcript_20984:277-1407(+)
ATGGATTCGAATAATTGGAGACCTACTACACAACCTGATCAACCACCTCCAATTGATGGCGGTGGTGATTGGCGTACCCAGTTTCAACCTGAATCCCGCCAAAGGATCGTCAATAAGATAATGGAGACTTTAAAGAGGCATGTCCCTTTTTCTGGCCAATATTGGTTGCAGGATCTCAAGAAGATTGCAATAAGATTTGAAGAAAAAATATACAGTGCGGCTACAAACCAGACTGATTACCTGCGGAAGATATCCCTGAAGATGCTTACAATGGAGTCAAATAACAAGACTGCACTCCCCAGTGCTATGCCTTCCAACTCTGCTGGTGCTGGTGTGAGCAGAAATCCACAAGACCAAGTGCCTTCCCAAAACATGCAATCACAAGTGCACAATCAAGGTCAATCTGTGCCCTTGCAGATGGTATCTAATCAGCCTCAACGGCAACAGCTTTTGGCTCAGAACATGCAAAACAATTTGACATCTTCTGGAATGCAAACATCTGCCAGCTTGCCAAATTCTTTACCTCCTGTCAGTGGTTTGACACAGAATACCATGTCCAATGTTGCTCATAATCCCAACCTGCAAAATATATCTGGCATTTCACAGAACTCAATGGGAAATACAATGAATCAGGGAGTTGCTTCAAATATGTTCACAAATTCACAAAGACAAATGCAAGGAAGGCCGCATACTCAACAGGTTGGTTCTCAACAGCAGTCGCAGCAGTCTCAGAATTCCCAGCAATACATGTACCAGCAACAGTTGCAACAGCAGATGTTGAAGCAGAAGTTACAACAAGGGAATATTCAACAACCACTTATGCAGACACCAATGCAGCAACAGCAGCAACAACAACCTCAGCAGCAGCAAAACTTGTTACAGGCTGCTCAGTTGCAATCTTCTCAGCAGCCAATGATGCCAACATCATCTGTTGTTCAGCCTTCCATGATTTCTGGGTTGCAACAGAATCAGCAGTCCATTCAACAACTGCCTCAGCCTGTTCTTCAGCAACATCAACAATCAGTACTTAGACAGCAGCAACAACAGCAGCAGCAGCAGCAACAGACTCCTGTTATTCAGCAGCAACAAACGCAAATGTCACAGCAGTCAATGATGCCATCACAGCAGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20984.p1 GENE.R_Transcript_20984~~R_Transcript_20984.p1 ORF type:3prime_partial len:378 (+),score=110.56,KIX_2|PF16987.1|3.2e-22,KIX_2|PF16987.1|1.6e+04,KIX_2|PF16987.1|1.6e+04 R_Transcript_20984:277-1407(+)
MDSNNWRPTTQPDQPPPIDGGGDWRTQFQPESRQRIVNKIMETLKRHVPFSGQYWLQDLKKIAIRFEEKIYSAATNQTDYLRKISLKMLTMESNNKTALPSAMPSNSAGAGVSRNPQDQVPSQNMQSQVHNQGQSVPLQMVSNQPQRQQLLAQNMQNNLTSSGMQTSASLPNSLPPVSGLTQNTMSNVAHNPNLQNISGISQNSMGNTMNQGVASNMFTNSQRQMQGRPHTQQVGSQQQSQQSQNSQQYMYQQQLQQQMLKQKLQQGNIQQPLMQTPMQQQQQQQPQQQQNLLQAAQLQSSQQPMMPTSSVVQPSMISGLQQNQQSIQQLPQPVLQQHQQSVLRQQQQQQQQQQQTPVIQQQQTQMSQQSMMPSQQQ

Click here to download the sequence:
Link to NCBI Protein BLAST